Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8050964.1 | |
| CAI8050965.1 | |
| CAI8050973.1 | ANKYRIN REPEAT CONTAINING |
| CAI8050983.1 | ANKYRIN REPEAT CONTAINING |
| CAI8050984.1 | MYOTROPHIN |
| CAI8050975.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8050977.1 | NF-KAPPA-B INHIBITOR ALPHA |
| CAI8050982.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8050978.1 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| CAI8050980.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8050976.1 | MOLTING PROTEIN MLT-4 |
| CAI8050979.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8050981.1 | MOLTING PROTEIN MLT-4 |
| CAI8050974.1 | ANKYRIN REPEAT CONTAINING |
| CAI8050986.1 | ANKYRIN REPEAT PROTEIN |
| CAI8050985.1 | POTE ANKYRIN DOMAIN |
| CAI8050987.1 | MOLTING PROTEIN MLT-4 |
| CAI8050988.1 | ANKYRIN REPEAT CONTAINING |
| CAI8050989.1 | THIAMINE PYROPHOSPHATE ENZYMES |
| CAI8050990.1 | DEHYDROGENASES, SHORT CHAIN |
| CAI8050991.1 | - |
| CAI8050992.1 | - |
| CAI8050993.1 | FMN REDUCTASE (NADPH) |
| CAI8050996.1 | ALKANESULFONATE MONOOXYGENASE-RELATED |
| CAI8050994.1 | ALKANESULFONATE MONOOXYGENASE-RELATED |
| CAI8050995.1 | ALKANESULFONATE MONOOXYGENASE-RELATED |
| CAI8050997.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8050998.1 | EPOXIDE HYDROLASE 1-RELATED |
| CAI8050999.1 | GLYOXALASE FAMILY PROTEIN |
| CAI8051001.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8051000.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8051002.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8051003.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8051004.1 | PERIPLASMIC PHOSPHATE BINDING COMPONENT OF PHOSPHATE ABC TRANSPORTER |
| CAI8051005.1 | PERIPLASMIC PHOSPHATE BINDING COMPONENT OF PHOSPHATE ABC TRANSPORTER |
| CAI8051006.1 | |
| CAI8051007.1 | LIPOPROTEIN-RELATED |
| CAI8051008.1 | LIPOPROTEIN-RELATED |
| CAI8051010.1 | |
| CAI8051009.1 | |
| CAI8051012.1 | ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED |
| CAI8051011.1 | ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED |
| CAI8051014.1 | FORKHEAD BOX PROTEIN J2 FAMILY MEMBER |
| CAI8051013.1 | |
| CAI8051015.1 | |
| CAI8051016.1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| CAI8051017.1 | DNA LIGASE 1/3 FAMILY MEMBER |
| CAI8051018.1 | GABA-B RECEPTOR |
| CAI8051019.1 | |
| CAI8051020.1 |
