Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8050671.1 | BASIGIN RELATED |
| CAI8050672.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8050673.1 | |
| CAI8050674.1 | |
| CAI8050675.1 | BASIGIN RELATED |
| CAI8050676.1 | |
| CAI8050677.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8050678.1 | |
| CAI8050679.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8050680.1 | |
| CAI8050681.1 | |
| CAI8050683.1 | INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE |
| CAI8050682.1 | INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE |
| CAI8050684.1 | ELECTRON TRANSPORT OXIDOREDUCTASE |
| CAI8050685.1 | ELECTRON TRANSPORT OXIDOREDUCTASE |
| CAI8050686.1 | ELECTRON TRANSPORT OXIDOREDUCTASE |
| CAI8050687.1 | ELECTRON TRANSPORT OXIDOREDUCTASE |
| CAI8050688.1 | |
| CAI8050689.1 | |
| CAI8050690.1 | HOMEOBOX PROTEIN MSX |
| CAI8050691.1 | SH3-BINDING |
| CAI8050692.1 | KINESIN-LIKE PROTEIN KIF11 |
| CAI8050693.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8050694.1 | |
| CAI8050695.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 |
| CAI8050696.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 |
| CAI8050697.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 |
| CAI8050698.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 |
| CAI8050699.1 | ADDUCIN |
| CAI8050700.1 | LATERAL SIGNALING TARGET PROTEIN 2 HOMOLOG |
| CAI8050701.1 | |
| CAI8050706.1 | DNAJ HOMOLOG SUBFAMILY B |
| CAI8050705.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 31 |
| CAI8050704.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 31 |
| CAI8050703.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 31 |
| CAI8050702.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 31 |
| CAI8050707.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 31 |
| CAI8050708.1 | DNAJ HOMOLOG SUBFAMILY B |
| CAI8050709.1 | MRNA-CAPPING ENZYME |
| CAI8050710.1 | MRNA-CAPPING ENZYME |
| CAI8050711.1 | |
| CAI8050712.1 | |
| CAI8050713.1 | PROTEIN FAM45A-RELATED |
| CAI8050714.1 | UNCHARACTERIZED |
| CAI8050716.1 | NUCLEOLAR COMPLEX PROTEIN 3 |
| CAI8050715.1 | NUCLEOLAR COMPLEX PROTEIN 3 |
| CAI8050717.1 | |
| CAI8050718.1 | ROLLING PEBBLES, ISOFORM B |
| CAI8050719.1 | ANKYRIN REPEAT CONTAINING |
| CAI8050723.1 | ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED |
