Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8050471.1 | |
| CAI8050472.1 | FORKHEAD BOX PROTEIN G1 |
| CAI8050473.1 | TUBERIN |
| CAI8050474.1 | |
| CAI8050475.1 | TUBERIN |
| CAI8050476.1 | CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR |
| CAI8050477.1 | RAPSYN-RELATED |
| CAI8050478.1 | |
| CAI8050483.1 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| CAI8050482.1 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| CAI8050481.1 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| CAI8050480.1 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| CAI8050479.1 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| CAI8050486.1 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| CAI8050485.1 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| CAI8050484.1 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| CAI8050487.1 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| CAI8050488.1 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| CAI8050489.1 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| CAI8050490.1 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| CAI8050491.1 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| CAI8050492.1 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
| CAI8050494.1 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
| CAI8050493.1 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
| CAI8050495.1 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
| CAI8050496.1 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
| CAI8050497.1 | |
| CAI8050500.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| CAI8050501.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| CAI8050499.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| CAI8050502.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| CAI8050498.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| CAI8050504.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| CAI8050503.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| CAI8050505.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| CAI8050507.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| CAI8050506.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| CAI8050508.1 | |
| CAI8050509.1 | EXOCYST COMPLEX COMPONENT 8 |
| CAI8050512.1 | EXOCYST COMPLEX COMPONENT 8 |
| CAI8050511.1 | EXOCYST COMPLEX COMPONENT 8 |
| CAI8050510.1 | EXOCYST COMPLEX COMPONENT 8 |
| CAI8050514.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8050513.1 | |
| CAI8050515.1 | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT |
| CAI8050516.1 | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT |
| CAI8050518.1 | NEDD4 FAMILY INTERACTING PROTEIN 1/2 |
| CAI8050517.1 | NEDD4 FAMILY INTERACTING PROTEIN 1/2 |
| CAI8050519.1 | |
| CAI8050520.1 |
