Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8050421.1 | |
| CAI8050422.1 | |
| CAI8050423.1 | SULFATE TRANSPORTER |
| CAI8050424.1 | HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY |
| CAI8050430.1 | TYPE III PANTOTHENATE KINASE |
| CAI8050428.1 | TYPE III PANTOTHENATE KINASE |
| CAI8050429.1 | TYPE III PANTOTHENATE KINASE |
| CAI8050427.1 | TYPE III PANTOTHENATE KINASE |
| CAI8050426.1 | TYPE III PANTOTHENATE KINASE |
| CAI8050425.1 | TYPE III PANTOTHENATE KINASE |
| CAI8050431.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8050432.1 | |
| CAI8050433.1 | NUDIX HYDROLASE, NUDC SUBFAMILY |
| CAI8050434.1 | PEPTIDYL-TRNA HYDROLASE |
| CAI8050435.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8050436.1 | XYLOGLUCANASE (EUROFUNG) |
| CAI8050437.1 | BLR3294 PROTEIN |
| CAI8050438.1 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
| CAI8050439.1 | PHOSPHOENOLPYRUVATE CARBOXYLASE |
| CAI8050440.1 | |
| CAI8050441.1 | LUD_DOM DOMAIN-CONTAINING PROTEIN |
| CAI8050442.1 | THIOSULFATE SULFERTANSFERASE |
| CAI8050445.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8050444.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8050443.1 | |
| CAI8050446.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8050447.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8050448.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8050453.1 | MICROSPHERULE PROTEIN 1 |
| CAI8050452.1 | MICROSPHERULE PROTEIN 1 |
| CAI8050451.1 | MICROSPHERULE PROTEIN 1 |
| CAI8050450.1 | |
| CAI8050449.1 | |
| CAI8050454.1 | MICROSPHERULE PROTEIN 1 |
| CAI8050455.1 | MICROSPHERULE PROTEIN 1 |
| CAI8050458.1 | |
| CAI8050457.1 | |
| CAI8050459.1 | |
| CAI8050456.1 | |
| CAI8050460.1 | |
| CAI8050461.1 | DIMETHYLADENOSINE TRANSFERASE |
| CAI8050464.1 | SNF2/RAD54 HELICASE FAMILY |
| CAI8050463.1 | SNF2/RAD54 HELICASE FAMILY |
| CAI8050462.1 | SNF2/RAD54 HELICASE FAMILY |
| CAI8050465.1 | SNF2/RAD54 HELICASE FAMILY |
| CAI8050466.1 | SNF2/RAD54 HELICASE FAMILY |
| CAI8050467.1 | PEPTIDASE-RELATED |
| CAI8050468.1 | PEPTIDASE-RELATED |
| CAI8050469.1 | |
| CAI8050470.1 | ANKYRIN REPEAT FAMILY PROTEIN |
