Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8050372.1 | |
| CAI8050371.1 | |
| CAI8050373.1 | |
| CAI8050377.1 | ALSIN HOMOLOG |
| CAI8050376.1 | ALSIN HOMOLOG |
| CAI8050375.1 | ALSIN HOMOLOG |
| CAI8050378.1 | ALSIN HOMOLOG |
| CAI8050374.1 | |
| CAI8050379.1 | FIBRILLIN-RELATED |
| CAI8050380.1 | |
| CAI8050381.1 | |
| CAI8050384.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8050383.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8050382.1 | |
| CAI8050385.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8050386.1 | SPINDLE AND CENTRIOLE ASSOCIATED PROTEIN 1 SPICE1 |
| CAI8050387.1 | |
| CAI8050388.1 | |
| CAI8050389.1 | |
| CAI8050390.1 | OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN |
| CAI8050391.1 | SELENOPROTEIN T |
| CAI8050392.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8050393.1 | |
| CAI8050394.1 | |
| CAI8050395.1 | |
| CAI8050396.1 | |
| CAI8050397.1 | |
| CAI8050398.1 | |
| CAI8050399.1 | |
| CAI8050401.1 | LD18447P |
| CAI8050400.1 | LD18447P |
| CAI8050402.1 | D-AMINO ACID OXIDASE |
| CAI8050403.1 | PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN |
| CAI8050404.1 | MYOSIN REGULATORY LIGHT CHAIN 2 |
| CAI8050405.1 | 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER |
| CAI8050410.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| CAI8050409.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| CAI8050408.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| CAI8050407.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| CAI8050406.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| CAI8050411.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| CAI8050412.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| CAI8050413.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| CAI8050414.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| CAI8050415.1 | |
| CAI8050416.1 | |
| CAI8050417.1 | |
| CAI8050418.1 | |
| CAI8050420.1 | |
| CAI8050419.1 |
