Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8050022.1 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
| CAI8050020.1 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
| CAI8050019.1 | |
| CAI8050024.1 | |
| CAI8050025.1 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
| CAI8050026.1 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
| CAI8050027.1 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
| CAI8050028.1 | |
| CAI8050029.1 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
| CAI8050030.1 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
| CAI8050031.1 | S-FORMYLGLUTATHIONE HYDROLASE |
| CAI8050033.1 | 60S ACIDIC RIBOSOMAL PROTEIN P0 |
| CAI8050032.1 | 60S ACIDIC RIBOSOMAL PROTEIN P0 |
| CAI8050034.1 | 60S ACIDIC RIBOSOMAL PROTEIN P0 |
| CAI8050035.1 | TIP120 |
| CAI8050036.1 | TIP120 |
| CAI8050037.1 | ANKYRIN DOMAIN-CONTAINING |
| CAI8050038.1 | |
| CAI8050039.1 | GATA ZINC FINGER DOMAIN-CONTAINING |
| CAI8050040.1 | DOUBLECORTIN DOMAIN CONTAINING 2 |
| CAI8050041.1 | DOUBLECORTIN DOMAIN CONTAINING 2 |
| CAI8050043.1 | TRANSLATION FACTOR |
| CAI8050042.1 | TRANSLATION FACTOR |
| CAI8050045.1 | TRANSLATION FACTOR |
| CAI8050044.1 | TRANSLATION FACTOR |
| CAI8050047.1 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
| CAI8050046.1 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
| CAI8050048.1 | PEPTIDYLPROLYL ISOMERASE |
| CAI8050049.1 | PEPTIDYLPROLYL ISOMERASE |
| CAI8050050.1 | |
| CAI8050051.1 | |
| CAI8050052.1 | ANAPHASE-PROMOTING COMPLEX 10 |
| CAI8050053.1 | CALPONIN |
| CAI8050054.1 | CALPONIN |
| CAI8050055.1 | ZGC:136858 |
| CAI8050057.1 | |
| CAI8050056.1 | |
| CAI8050058.1 | |
| CAI8050059.1 | UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN |
| CAI8050063.1 | NUCLEOSIDE DIPHOSPHATE KINASE |
| CAI8050062.1 | NUCLEOSIDE DIPHOSPHATE KINASE |
| CAI8050061.1 | NUCLEOSIDE DIPHOSPHATE KINASE |
| CAI8050060.1 | NUCLEOSIDE DIPHOSPHATE KINASE |
| CAI8050064.1 | |
| CAI8050065.1 | BONUS, ISOFORM C-RELATED |
| CAI8050071.1 | KINETOCHORE-ASSOCIATED PROTEIN 1 |
| CAI8050070.1 | KINETOCHORE-ASSOCIATED PROTEIN 1 |
| CAI8050072.1 | KINETOCHORE-ASSOCIATED PROTEIN 1 |
| CAI8050069.1 | KINETOCHORE-ASSOCIATED PROTEIN 1 |
| CAI8050068.1 | KINETOCHORE-ASSOCIATED PROTEIN 1 |
