Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8049970.1 | |
| CAI8049972.1 | CYTOCHROME P450 20A1 |
| CAI8049973.1 | |
| CAI8049974.1 | |
| CAI8049975.1 | |
| CAI8049976.1 | |
| CAI8049977.1 | |
| CAI8049978.1 | |
| CAI8049980.1 | PURPLE ACID PHOSPHATASE |
| CAI8049979.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8049981.1 | RAS-RELATED PROTEIN RAB |
| CAI8049983.1 | UBX DOMAIN-CONTAINING PROTEIN 1 |
| CAI8049982.1 | UBX DOMAIN-CONTAINING PROTEIN 1 |
| CAI8049984.1 | UBX DOMAIN-CONTAINING PROTEIN 1 |
| CAI8049985.1 | UBX DOMAIN-CONTAINING PROTEIN 1 |
| CAI8049986.1 | COMM DOMAIN-CONTAINING PROTEIN 3 |
| CAI8049987.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8049988.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8049990.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8049989.1 | |
| CAI8049991.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8049992.1 | |
| CAI8049993.1 | |
| CAI8049994.1 | |
| CAI8049996.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8049997.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8049995.1 | |
| CAI8049998.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8049999.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8050000.1 | D-TYROSYL-TRNA TYR DEACYLASE |
| CAI8050001.1 | D-TYROSYL-TRNA TYR DEACYLASE |
| CAI8050002.1 | D-TYROSYL-TRNA TYR DEACYLASE |
| CAI8050003.1 | D-TYROSYL-TRNA TYR DEACYLASE |
| CAI8050004.1 | |
| CAI8050005.1 | |
| CAI8050006.1 | |
| CAI8050007.1 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
| CAI8050008.1 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
| CAI8050009.1 | |
| CAI8050010.1 | 7-CYANO-7-DEAZAGUANINE SYNTHASE |
| CAI8050011.1 | 7-CYANO-7-DEAZAGUANINE SYNTHASE |
| CAI8050012.1 | DEGV DOMAIN-CONTAINING PROTEIN DR_1986-RELATED |
| CAI8050013.1 | UNCHARACTERIZED NUCLEAR HORMONE RECEPTOR-RELATED |
| CAI8050014.1 | REGULATOR OF RPOS |
| CAI8050015.1 | TWO-COMPONENT HISTIDINE KINASE |
| CAI8050016.1 | |
| CAI8050018.1 | LIG_CHAN-GLU_BD DOMAIN-CONTAINING PROTEIN |
| CAI8050017.1 | |
| CAI8050021.1 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
| CAI8050023.1 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
