Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8049671.1 | |
| CAI8049673.1 | PROTEIN SIDEKICK |
| CAI8049672.1 | PROTEIN SIDEKICK |
| CAI8049674.1 | TITIN |
| CAI8049675.1 | |
| CAI8049676.1 | |
| CAI8049677.1 | |
| CAI8049678.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8049679.1 | |
| CAI8049682.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8049680.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8049681.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8049683.1 | |
| CAI8049684.1 | |
| CAI8049703.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8049702.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8049701.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8049697.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8049700.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8049699.1 | ANKYRIN REPEAT CONTAINING |
| CAI8049698.1 | ANKYRIN REPEAT CONTAINING |
| CAI8049696.1 | ANKYRIN REPEAT CONTAINING |
| CAI8049695.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8049694.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8049692.1 | MYOTROPHIN |
| CAI8049693.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8049689.1 | SI:CH211-189E2.2 |
| CAI8049691.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8049690.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8049688.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8049687.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8049686.1 | SI:CH211-189E2.2 |
| CAI8049685.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8049704.1 | ANKYRIN REPEAT PROTEIN |
| CAI8049705.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8049706.1 | REGULATOR OF RPOS |
| CAI8049707.1 | TWO-COMPONENT HISTIDINE KINASE |
| CAI8049708.1 | STRESS RESPONSE PROTEIN NHAX |
| CAI8049709.1 | ANTI-SIGMA FACTOR ANTAGONIST TM_1081-RELATED-RELATED |
| CAI8049710.1 | DNA REPAIR PROTEIN RADC |
| CAI8049711.1 | DNA REPAIR PROTEIN RADC |
| CAI8049712.1 | 23S RRNA (GUANOSINE-2'-O-)-METHYLTRANSFERASE RLMB |
| CAI8049713.1 | THIAMINE PYROPHOSPHATE ENZYMES |
| CAI8049715.1 | THIAMINE PYROPHOSPHATE ENZYMES |
| CAI8049714.1 | THIAMINE PYROPHOSPHATE ENZYMES |
| CAI8049716.1 | 2-KETO-3-DEOXY-6-PHOSPHOGLUCONATE ALDOLASE |
| CAI8049717.1 | HEMOLYSIN-RELATED |
| CAI8049720.1 | GTP CYCLOHYDROLASE I |
| CAI8049719.1 | GTP CYCLOHYDROLASE I |
| CAI8049718.1 | GTP CYCLOHYDROLASE I |
