Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8049521.1 | UDP-N-ACETYLMURAMATE--L-ALANINE LIGASE-RELATED |
| CAI8049525.1 | FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) |
| CAI8049529.1 | FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) |
| CAI8049526.1 | FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) |
| CAI8049527.1 | FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) |
| CAI8049528.1 | |
| CAI8049523.1 | |
| CAI8049522.1 | |
| CAI8049524.1 | |
| CAI8049530.1 | FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) |
| CAI8049531.1 | FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) |
| CAI8049532.1 | FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) |
| CAI8049533.1 | |
| CAI8049534.1 | |
| CAI8049535.1 | |
| CAI8049536.1 | UNCHARACTERIZED |
| CAI8049537.1 | |
| CAI8049538.1 | OTU DOMAIN CONTAINING PROTEIN |
| CAI8049539.1 | BETA-GALACTOSIDASE RELATED |
| CAI8049540.1 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
| CAI8049541.1 | |
| CAI8049543.1 | |
| CAI8049542.1 | |
| CAI8049547.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8049544.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8049545.1 | |
| CAI8049548.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8049546.1 | |
| CAI8049549.1 | |
| CAI8049550.1 | |
| CAI8049551.1 | |
| CAI8049552.1 | |
| CAI8049553.1 | |
| CAI8049555.1 | S-ADENOSYLMETHIONINE:TRNA RIBOSYLTRANSFERASE-ISOMERASE |
| CAI8049556.1 | S-ADENOSYLMETHIONINE:TRNA RIBOSYLTRANSFERASE-ISOMERASE |
| CAI8049554.1 | S-ADENOSYLMETHIONINE:TRNA RIBOSYLTRANSFERASE-ISOMERASE |
| CAI8049558.1 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
| CAI8049557.1 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
| CAI8049559.1 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
| CAI8049560.1 | OS10G0469600 PROTEIN |
| CAI8049561.1 | BLR0278 PROTEIN |
| CAI8049562.1 | ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL |
| CAI8049564.1 | ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL |
| CAI8049563.1 | ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL |
| CAI8049566.1 | GTPASE DER |
| CAI8049565.1 | GTPASE DER |
| CAI8049567.1 | GTPASE DER |
| CAI8049568.1 | GTPASE DER |
| CAI8049569.1 | GTPASE DER |
| CAI8049570.1 | GTPASE DER |
