About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8049371.1
CAI8049375.1AMINO ACID TRANSPORTER
CAI8049376.1AMINO ACID TRANSPORTER
CAI8049374.1AMINO ACID TRANSPORTER
CAI8049373.1AMINO ACID TRANSPORTER
CAI8049372.1AMINO ACID TRANSPORTER
CAI8049377.1AMINO ACID TRANSPORTER
CAI8049378.1TNF RECEPTOR ASSOCIATED FACTOR
CAI8049379.1LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN
CAI8049380.1N-ALPHA-ACETYLTRANSFERASE 20
CAI8049381.1
CAI8049382.1UNCHARACTERIZED
CAI8049383.1BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED
CAI8049391.1UNCHARACTERIZED
CAI8049389.1UNCHARACTERIZED
CAI8049388.1UNCHARACTERIZED
CAI8049390.1UNCHARACTERIZED
CAI8049386.1UNCHARACTERIZED
CAI8049387.1UNCHARACTERIZED
CAI8049385.1UNCHARACTERIZED
CAI8049384.1UNCHARACTERIZED
CAI8049392.1UNCHARACTERIZED
CAI8049393.1UNCHARACTERIZED
CAI8049394.1UNCHARACTERIZED
CAI8049395.1UNCHARACTERIZED
CAI8049396.1UNCHARACTERIZED
CAI8049398.1EPH RECEPTOR A5
CAI8049399.1EPH RECEPTOR A5
CAI8049397.1
CAI8049400.1
CAI8049406.1WD REPEAT DOMAIN 62, ISOFORM G
CAI8049409.1WD REPEAT DOMAIN 62, ISOFORM G
CAI8049408.1WD REPEAT DOMAIN 62, ISOFORM G
CAI8049407.1WD REPEAT DOMAIN 62, ISOFORM G
CAI8049405.1WD REPEAT DOMAIN 62, ISOFORM G
CAI8049404.1WD REPEAT DOMAIN 62, ISOFORM G
CAI8049403.1
CAI8049402.1
CAI8049401.1
CAI8049410.1WD REPEAT DOMAIN 62, ISOFORM G
CAI8049411.1WD REPEAT DOMAIN 62, ISOFORM G
CAI8049414.1PROTEIN KINASE C, MU
CAI8049417.1PROTEIN KINASE C, MU
CAI8049416.1PROTEIN KINASE C, MU
CAI8049415.1PROTEIN KINASE C, MU
CAI8049413.1PROTEIN KINASE C, MU
CAI8049412.1
CAI8049418.1PUTATIVE PHOSPHOTRANSFERASE
CAI8049419.1SOLUTE CARRIER FAMILY 35
CAI8049420.1SOLUTE CARRIER FAMILY 35
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