Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8049071.1 | PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER |
| CAI8049072.1 | BACTERIAL HEMOLYSIN-LIKE PROTEIN |
| CAI8049073.1 | |
| CAI8049074.1 | NICOTINAMIDE-NUCLEOTIDE AMIDOHYDROLASE PNCC |
| CAI8049075.1 | PEPTIDASE S45 PENICILLIN AMIDASE |
| CAI8049076.1 | - |
| CAI8049077.1 | DEHYDROGENASES, SHORT CHAIN |
| CAI8049078.1 | ALKANESULFONATE MONOOXYGENASE |
| CAI8049079.1 | PEPTIDYL-TRNA HYDROLASE |
| CAI8049080.1 | PEPTIDYL-TRNA HYDROLASE |
| CAI8049081.1 | NUDIX HYDROLASE RELATED |
| CAI8049082.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
| CAI8049083.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
| CAI8049086.1 | TRANS-ACONITATE 2-METHYLTRANSFERASE-RELATED |
| CAI8049085.1 | TRANS-ACONITATE 2-METHYLTRANSFERASE-RELATED |
| CAI8049084.1 | TRANS-ACONITATE 2-METHYLTRANSFERASE-RELATED |
| CAI8049087.1 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
| CAI8049088.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8049089.1 | ARYLACETAMIDE DEACETYLASE |
| CAI8049090.1 | |
| CAI8049091.1 | GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE |
| CAI8049092.1 | GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE |
| CAI8049093.1 | 4-HYDROXYPHENYLACETATE 3-MONOOXYGENASE-RELATED |
| CAI8049094.1 | F-BOX ONLY PROTEIN 22 |
| CAI8049095.1 | FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED |
| CAI8049096.1 | |
| CAI8049098.1 | |
| CAI8049097.1 | |
| CAI8049101.1 | |
| CAI8049100.1 | |
| CAI8049099.1 | |
| CAI8049102.1 | |
| CAI8049103.1 | RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED |
| CAI8049104.1 | RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED |
| CAI8049105.1 | RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED |
| CAI8049108.1 | |
| CAI8049107.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8049106.1 | |
| CAI8049109.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8049110.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8049111.1 | |
| CAI8049112.1 | |
| CAI8049113.1 | |
| CAI8049114.1 | |
| CAI8049115.1 | |
| CAI8049117.1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| CAI8049116.1 | |
| CAI8049118.1 | |
| CAI8049120.1 | |
| CAI8049119.1 |
