Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8048972.1 | DOPAMINE BETA HYDROXYLASE RELATED |
| CAI8048971.1 | DOPAMINE BETA HYDROXYLASE RELATED |
| CAI8048973.1 | |
| CAI8048974.1 | DOPAMINE BETA HYDROXYLASE RELATED |
| CAI8048975.1 | |
| CAI8048976.1 | PROLYL ENDOPEPTIDASE |
| CAI8048977.1 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| CAI8048978.1 | |
| CAI8048979.1 | GUANYLATE BINDING PROTEIN |
| CAI8048982.1 | ROLLING PEBBLES, ISOFORM B |
| CAI8048983.1 | KINASE D-INTERACTING SUBSTRATE OF 220 KDA |
| CAI8048981.1 | ANKYRIN REPEAT CONTAINING |
| CAI8048980.1 | ANKYRIN REPEAT FAMILY A |
| CAI8048984.1 | KINASE D-INTERACTING SUBSTRATE OF 220 KDA |
| CAI8048985.1 | ROLLING PEBBLES, ISOFORM B |
| CAI8048986.1 | KINASE D-INTERACTING SUBSTRATE OF 220 KDA |
| CAI8048987.1 | KINASE D-INTERACTING SUBSTRATE OF 220 KDA |
| CAI8048988.1 | MOLTING PROTEIN MLT-4 |
| CAI8048989.1 | MOLTING PROTEIN MLT-4 |
| CAI8048990.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8048991.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| CAI8048992.1 | |
| CAI8048993.1 | |
| CAI8048994.1 | |
| CAI8048995.1 | |
| CAI8048996.1 | |
| CAI8048997.1 | |
| CAI8049000.1 | HISTIDINE AMMONIA-LYASE |
| CAI8048999.1 | HISTIDINE AMMONIA-LYASE |
| CAI8048998.1 | |
| CAI8049002.1 | HISTIDINE AMMONIA-LYASE |
| CAI8049001.1 | HISTIDINE AMMONIA-LYASE |
| CAI8049003.1 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
| CAI8049004.1 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
| CAI8049005.1 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
| CAI8049006.1 | GEO13361P1-RELATED |
| CAI8049012.1 | UNCHARACTERIZED |
| CAI8049011.1 | UNCHARACTERIZED |
| CAI8049010.1 | UNCHARACTERIZED |
| CAI8049009.1 | UNCHARACTERIZED |
| CAI8049008.1 | |
| CAI8049007.1 | |
| CAI8049013.1 | UNCHARACTERIZED |
| CAI8049014.1 | MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED |
| CAI8049015.1 | |
| CAI8049016.1 | |
| CAI8049018.1 | N-LYSINE METHYLTRANSFERASE KMT5A |
| CAI8049017.1 | N-LYSINE METHYLTRANSFERASE KMT5A |
| CAI8049019.1 | |
| CAI8049020.1 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
