Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8049022.1 | UBIQUITIN LIGASE PROTEIN CHFR |
| CAI8049024.1 | UBIQUITIN LIGASE PROTEIN CHFR |
| CAI8049023.1 | UBIQUITIN LIGASE PROTEIN CHFR |
| CAI8049021.1 | UBIQUITIN LIGASE PROTEIN CHFR |
| CAI8049025.1 | UBIQUITIN LIGASE PROTEIN CHFR |
| CAI8049026.1 | UBIQUITIN LIGASE PROTEIN CHFR |
| CAI8049027.1 | UBIQUITIN LIGASE PROTEIN CHFR |
| CAI8049029.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 |
| CAI8049028.1 | UNCHARACTERIZED |
| CAI8049030.1 | |
| CAI8049031.1 | |
| CAI8049034.1 | CELL CYCLE CONTROL PROTEIN CWF22-RELATED |
| CAI8049032.1 | CELL CYCLE CONTROL PROTEIN CWF22-RELATED |
| CAI8049033.1 | CELL CYCLE CONTROL PROTEIN CWF22-RELATED |
| CAI8049035.1 | CELL CYCLE CONTROL PROTEIN CWF22-RELATED |
| CAI8049036.1 | CELL CYCLE CONTROL PROTEIN CWF22-RELATED |
| CAI8049037.1 | |
| CAI8049039.1 | |
| CAI8049038.1 | |
| CAI8049040.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8049041.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8049042.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8049043.1 | |
| CAI8049046.1 | |
| CAI8049045.1 | |
| CAI8049044.1 | |
| CAI8049047.1 | |
| CAI8049048.1 | |
| CAI8049049.1 | |
| CAI8049050.1 | 3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 1, MITOCHONDRIAL-RELATED |
| CAI8049051.1 | |
| CAI8049052.1 | INNER MEMBRANE PROTEIN YGIH |
| CAI8049056.1 | GTPASE DER |
| CAI8049055.1 | GTPASE DER |
| CAI8049054.1 | GTPASE DER |
| CAI8049053.1 | GTPASE DER |
| CAI8049057.1 | ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL |
| CAI8049058.1 | |
| CAI8049060.1 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
| CAI8049059.1 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
| CAI8049061.1 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
| CAI8049062.1 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
| CAI8049063.1 | S-ADENOSYLMETHIONINE:TRNA RIBOSYLTRANSFERASE-ISOMERASE |
| CAI8049064.1 | S-ADENOSYLMETHIONINE:TRNA RIBOSYLTRANSFERASE-ISOMERASE |
| CAI8049065.1 | ACYLPYRUVASE |
| CAI8049066.1 | XYLOGLUCANASE (EUROFUNG) |
| CAI8049067.1 | LIPOPROTEIN-RELATED |
| CAI8049068.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
| CAI8049069.1 | DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED |
| CAI8049070.1 |
