Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8049771.1 | CYSTATHIONINE BETA-SYNTHASE |
| CAI8049772.1 | |
| CAI8049773.1 | |
| CAI8049774.1 | |
| CAI8049775.1 | |
| CAI8049776.1 | |
| CAI8049777.1 | |
| CAI8049778.1 | |
| CAI8049779.1 | |
| CAI8049780.1 | WITH PUTATIVE URIDYL PYROPHOSPHORYLASE-RELATED |
| CAI8049781.1 | |
| CAI8049782.1 | |
| CAI8049784.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8049783.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8049785.1 | |
| CAI8049786.1 | |
| CAI8049788.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8049787.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8049789.1 | |
| CAI8049790.1 | |
| CAI8049791.1 | TUBULIN FOLDING COFACTOR C |
| CAI8049792.1 | |
| CAI8049793.1 | |
| CAI8049794.1 | |
| CAI8049796.1 | ALPHA- 1,6 -FUCOSYLTRANSFERASE |
| CAI8049795.1 | ALPHA- 1,6 -FUCOSYLTRANSFERASE |
| CAI8049797.1 | TRANSMEMBRANE PROTEIN 136 |
| CAI8049798.1 | STABILIZER OF AXONEMAL MICROTUBULES 2 |
| CAI8049803.1 | TRIACYLGLYCEROL LIPASE |
| CAI8049802.1 | TRIACYLGLYCEROL LIPASE |
| CAI8049801.1 | TRIACYLGLYCEROL LIPASE |
| CAI8049800.1 | TRIACYLGLYCEROL LIPASE |
| CAI8049799.1 | TRIACYLGLYCEROL LIPASE |
| CAI8049804.1 | TRIACYLGLYCEROL LIPASE |
| CAI8049805.1 | PROTEIN FLATTOP |
| CAI8049806.1 | UNCHARACTERIZED |
| CAI8049807.1 | CORRINOID ADENOSYLTRANSFERASE |
| CAI8049808.1 | IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISH |
| CAI8049809.1 | 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE |
| CAI8049810.1 | 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE |
| CAI8049811.1 | ALDEHYDE DEHYDROGENASE |
| CAI8049812.1 | |
| CAI8049813.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8049814.1 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
| CAI8049815.1 | |
| CAI8049816.1 | |
| CAI8049820.1 | GCIP-INTERACTING PROTEIN P29 |
| CAI8049821.1 | GCIP-INTERACTING PROTEIN P29 |
| CAI8049819.1 | GCIP-INTERACTING PROTEIN P29 |
| CAI8049817.1 | GCIP-INTERACTING PROTEIN P29 |
