Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8049818.1 | GCIP-INTERACTING PROTEIN P29 |
| CAI8049822.1 | |
| CAI8049823.1 | |
| CAI8049824.1 | |
| CAI8049825.1 | |
| CAI8049826.1 | DNA-DIRECTED RNA POLYMERASE SUBUNIT K |
| CAI8049827.1 | |
| CAI8049828.1 | SORBITOL DEHYDROGENASE |
| CAI8049829.1 | SORBITOL DEHYDROGENASE |
| CAI8049830.1 | SORBITOL DEHYDROGENASE |
| CAI8049831.1 | |
| CAI8049832.1 | |
| CAI8049833.1 | FGF BINDING PROTEIN-RELATED |
| CAI8049834.1 | BTK-BINDING PROTEIN-RELATED |
| CAI8049835.1 | |
| CAI8049839.1 | SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2 |
| CAI8049838.1 | SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2 |
| CAI8049837.1 | SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2 |
| CAI8049836.1 | SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2 |
| CAI8049841.1 | SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2 |
| CAI8049840.1 | SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2 |
| CAI8049842.1 | SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2 |
| CAI8049843.1 | SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2 |
| CAI8049844.1 | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE |
| CAI8049845.1 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7 |
| CAI8049848.1 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7 |
| CAI8049847.1 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7 |
| CAI8049846.1 | |
| CAI8049849.1 | |
| CAI8049850.1 | |
| CAI8049851.1 | EXPRESSED PROTEIN |
| CAI8049852.1 | EXPRESSED PROTEIN |
| CAI8049853.1 | |
| CAI8049856.1 | |
| CAI8049855.1 | |
| CAI8049854.1 | |
| CAI8049857.1 | |
| CAI8049858.1 | |
| CAI8049860.1 | |
| CAI8049859.1 | CENTROSOMAL PROTEIN 2 |
| CAI8049861.1 | CENTROSOMAL PROTEIN 2 |
| CAI8049862.1 | |
| CAI8049864.1 | O-METHYLTRANSFERASE |
| CAI8049863.1 | O-METHYLTRANSFERASE |
| CAI8049865.1 | PUTATIVE (AFU_ORTHOLOGUE AFUA_4G14580)-RELATED |
| CAI8049866.1 | |
| CAI8049867.1 | |
| CAI8049868.1 | |
| CAI8049874.1 | MYOSIN |
| CAI8049875.1 | MYOSIN |
