Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8049926.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8049924.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8049923.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8049922.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8049921.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8049920.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8049927.1 | CELL CYCLE CONTROL PROTEIN CWF15 |
| CAI8049928.1 | GLYPICAN |
| CAI8049930.1 | CALPONIN |
| CAI8049932.1 | - |
| CAI8049931.1 | - |
| CAI8049929.1 | - |
| CAI8049933.1 | - |
| CAI8049934.1 | - |
| CAI8049935.1 | - |
| CAI8049936.1 | - |
| CAI8049937.1 | - |
| CAI8049938.1 | - |
| CAI8049939.1 | - |
| CAI8049940.1 | JITTERBUG, ISOFORM N |
| CAI8049941.1 | JITTERBUG, ISOFORM N |
| CAI8049946.1 | |
| CAI8049945.1 | |
| CAI8049947.1 | |
| CAI8049943.1 | |
| CAI8049944.1 | |
| CAI8049942.1 | |
| CAI8049948.1 | |
| CAI8049949.1 | |
| CAI8049950.1 | |
| CAI8049952.1 | NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED |
| CAI8049951.1 | NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED |
| CAI8049953.1 | AGAP010540-PA |
| CAI8049954.1 | DYNEIN REGULATORY COMPLEX PROTEIN 9 |
| CAI8049955.1 | GABA-B RECEPTOR |
| CAI8049956.1 | |
| CAI8049961.1 | GABA-B RECEPTOR |
| CAI8049959.1 | GABA-B RECEPTOR |
| CAI8049960.1 | GABA-B RECEPTOR |
| CAI8049958.1 | GABA-B RECEPTOR |
| CAI8049957.1 | GABA-B RECEPTOR |
| CAI8049962.1 | GABA-B RECEPTOR |
| CAI8049963.1 | GABA-B RECEPTOR |
| CAI8049964.1 | |
| CAI8049966.1 | NADP-DEPENDENT MALIC ENZYME |
| CAI8049965.1 | NADP-DEPENDENT MALIC ENZYME |
| CAI8049967.1 | DIHYDROXY-ACID DEHYDRATASE DAD |
| CAI8049968.1 | DIHYDROXY-ACID DEHYDRATASE DAD |
| CAI8049969.1 | DIHYDROXY-ACID DEHYDRATASE DAD |
| CAI8049971.1 | HEAT-SHOCK PROTEIN 20 FAMILY MEMBER |
