Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7999331.1 | |
| CAI7999335.1 | |
| CAI7999333.1 | |
| CAI7999337.1 | |
| CAI7999343.1 | |
| CAI7999345.1 | |
| CAI7999341.1 | |
| CAI7999339.1 | |
| CAI7999347.1 | |
| CAI7999349.1 | |
| CAI7999351.1 | |
| CAI7999353.1 | |
| CAI7999355.1 | PYRUVATE CARBOXYLASE |
| CAI7999357.1 | |
| CAI7999359.1 | |
| CAI7999364.1 | ARYLACETAMIDE DEACETYLASE |
| CAI7999366.1 | |
| CAI7999368.1 | SI:CH211-175M2.5 |
| CAI7999370.1 | |
| CAI7999372.1 | |
| CAI7999374.1 | ABC TRANSPORTER, ATP-BINDING PROTEIN |
| CAI7999376.1 | PEPTIDASE T |
| CAI7999378.1 | MOLYBDOPTERIN SYNTHASE SULFUR CARRIER SUBUNIT |
| CAI7999380.1 | MOLYBDOPTERIN SYNTHASE RELATED |
| CAI7999382.1 | MOLYBDOPTERIN SYNTHASE RELATED |
| CAI7999384.1 | |
| CAI7999389.1 | |
| CAI7999403.1 | ANION EXCHANGE PROTEIN |
| CAI7999401.1 | ANION EXCHANGE PROTEIN |
| CAI7999395.1 | ANION EXCHANGE PROTEIN |
| CAI7999393.1 | ANION EXCHANGE PROTEIN |
| CAI7999391.1 | |
| CAI7999405.1 | ANION EXCHANGE PROTEIN |
| CAI7999397.1 | ANION EXCHANGE PROTEIN |
| CAI7999399.1 | |
| CAI7999407.1 | ANION EXCHANGE PROTEIN |
| CAI7999426.1 | DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE |
| CAI7999424.1 | DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE |
| CAI7999422.1 | DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE |
| CAI7999414.1 | DUAL SPECIFICITY PROTEIN PHOSPHATASE 19 |
| CAI7999416.1 | DUAL SPECIFICITY PROTEIN PHOSPHATASE 19 |
| CAI7999418.1 | |
| CAI7999420.1 | |
| CAI7999434.1 | DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE |
| CAI7999432.1 | DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE |
| CAI7999430.1 | DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE |
| CAI7999428.1 | DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE |
| CAI7999436.1 | DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE |
| CAI7999438.1 | DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE |
| CAI7999440.1 | DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE |
