Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7999180.1 | |
| CAI7999181.1 | LD33804P |
| CAI7999182.1 | G PROTEIN-COUPLED RECEPTOR-RELATED |
| CAI7999183.1 | G PROTEIN-COUPLED RECEPTOR-RELATED |
| CAI7999184.1 | |
| CAI7999185.1 | G PROTEIN-COUPLED RECEPTOR-RELATED |
| CAI7999186.1 | G PROTEIN-COUPLED RECEPTOR-RELATED |
| CAI7999188.1 | G PROTEIN-COUPLED RECEPTOR-RELATED |
| CAI7999187.1 | G PROTEIN-COUPLED RECEPTOR-RELATED |
| CAI7999189.1 | |
| CAI7999190.1 | |
| CAI7999192.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI7999193.1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| CAI7999191.1 | |
| CAI7999194.1 | |
| CAI7999195.1 | |
| CAI7999196.1 | |
| CAI7999197.1 | |
| CAI7999198.1 | |
| CAI7999199.1 | |
| CAI7999200.1 | PROTEIN CBG26694 |
| CAI7999201.1 | |
| CAI7999202.1 | |
| CAI7999204.1 | |
| CAI7999205.1 | |
| CAI7999203.1 | |
| CAI7999206.1 | |
| CAI7999207.1 | PEROXISOMAL SARCOSINE OXIDASE |
| CAI7999208.1 | UBIQUITINATION FACTOR E4 |
| CAI7999209.1 | UBIQUITINATION FACTOR E4 |
| CAI7999210.1 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
| CAI7999211.1 | DNAJ-LIKE-2, ISOFORM A-RELATED |
| CAI7999216.1 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
| CAI7999215.1 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
| CAI7999214.1 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED |
| CAI7999213.1 | NISCHARIN RELATED |
| CAI7999212.1 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED |
| CAI7999217.1 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
| CAI7999218.1 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
| CAI7999220.1 | PQ-LOOP REPEAT-CONTAINING PROTEIN 1-LIKE PROTEIN |
| CAI7999219.1 | PQ-LOOP REPEAT-CONTAINING PROTEIN 1-LIKE PROTEIN |
| CAI7999221.1 | |
| CAI7999223.1 | |
| CAI7999222.1 | |
| CAI7999224.1 | |
| CAI7999225.1 | |
| CAI7999226.1 | |
| CAI7999231.1 | |
| CAI7999229.1 | |
| CAI7999232.1 |
