Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8048271.1 | |
| CAI8048273.1 | CYTOKINE RECEPTOR |
| CAI8048272.1 | CYTOKINE RECEPTOR |
| CAI8048274.1 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19 |
| CAI8048275.1 | BASIGIN RELATED |
| CAI8048276.1 | PROTEIN SIDEKICK |
| CAI8048277.1 | TENASCIN |
| CAI8048278.1 | |
| CAI8048279.1 | |
| CAI8048280.1 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
| CAI8048281.1 | |
| CAI8048286.1 | ENOLASE |
| CAI8048285.1 | ENOLASE |
| CAI8048284.1 | ENOLASE |
| CAI8048283.1 | ENOLASE |
| CAI8048282.1 | ENOLASE |
| CAI8048287.1 | PYRUVATE-FLAVODOXIN OXIDOREDUCTASE-RELATED |
| CAI8048288.1 | PBS LYASE HEAT-LIKE PROTEIN |
| CAI8048289.1 | CYTOCHROME C ASSEMBLY PROTEIN-RELATED |
| CAI8048290.1 | |
| CAI8048291.1 | MOXR FAMILY PROTEIN |
| CAI8048293.1 | ARGININOSUCCINATE SYNTHASE |
| CAI8048292.1 | ARGININOSUCCINATE SYNTHASE |
| CAI8048294.1 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
| CAI8048295.1 | TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED |
| CAI8048297.1 | AMIDOPHOSPHORIBOSYLTRANSFERASE |
| CAI8048296.1 | AMIDOPHOSPHORIBOSYLTRANSFERASE |
| CAI8048298.1 | SECRETED GLYCOSYL HYDROLASE |
| CAI8048299.1 | |
| CAI8048300.1 | NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT |
| CAI8048301.1 | NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL |
| CAI8048302.1 | NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4 |
| CAI8048303.1 | NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4 |
| CAI8048304.1 | NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4 |
| CAI8048305.1 | NADH DEHYDROGENASE |
| CAI8048306.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 20 |
| CAI8048307.1 | ATP/GTP PHOSPHATASE |
| CAI8048308.1 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
| CAI8048309.1 | BETA-MANNOSIDASE |
| CAI8048310.1 | ARYLSULFATASE FAMILY MEMBER |
| CAI8048312.1 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 |
| CAI8048311.1 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 |
| CAI8048314.1 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 |
| CAI8048313.1 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 |
| CAI8048316.1 | UNCHARACTERIZED |
| CAI8048315.1 | UNCHARACTERIZED |
| CAI8048319.1 | |
| CAI8048317.1 | |
| CAI8048318.1 | |
| CAI8048320.1 |
