Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8048071.1 | |
| CAI8048072.1 | |
| CAI8048073.1 | CYTOKINE RECEPTOR |
| CAI8048074.1 | |
| CAI8048075.1 | |
| CAI8048077.1 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| CAI8048076.1 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| CAI8048078.1 | |
| CAI8048079.1 | |
| CAI8048082.1 | |
| CAI8048080.1 | |
| CAI8048081.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8048083.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8048084.1 | |
| CAI8048085.1 | NISCHARIN RELATED |
| CAI8048086.1 | |
| CAI8048087.1 | NISCHARIN RELATED |
| CAI8048088.1 | NISCHARIN RELATED |
| CAI8048089.1 | UNCHARACTERIZED |
| CAI8048091.1 | TRANSLOCON-ASSOCIATED PROTEIN, DELTA SUBUNIT |
| CAI8048090.1 | |
| CAI8048093.1 | GRIP-1 ASSOCIATED PROTEIN 1 |
| CAI8048092.1 | GRIP-1 ASSOCIATED PROTEIN 1 |
| CAI8048099.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8048098.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8048097.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8048096.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8048095.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8048094.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8048100.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8048101.1 | |
| CAI8048102.1 | |
| CAI8048103.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8048104.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8048105.1 | - |
| CAI8048106.1 | - |
| CAI8048111.1 | EH DOMAIN |
| CAI8048109.1 | EH DOMAIN |
| CAI8048108.1 | EH DOMAIN |
| CAI8048107.1 | EH DOMAIN |
| CAI8048110.1 | EH DOMAIN |
| CAI8048112.1 | CADHERIN-23 |
| CAI8048113.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8048114.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8048115.1 | |
| CAI8048116.1 | |
| CAI8048117.1 | SLR1406 PROTEIN |
| CAI8048118.1 | IMIDAZOLONEPROPIONASE |
| CAI8048119.1 | IMIDAZOLONEPROPIONASE |
| CAI8048120.1 |
