Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8047918.1 | UNCHARACTERIZED |
| CAI8047922.1 | FRINGE-RELATED |
| CAI8047923.1 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
| CAI8047924.1 | |
| CAI8047925.1 | |
| CAI8047926.1 | |
| CAI8047927.1 | SYNTAXIN |
| CAI8047928.1 | UNCHARACTERIZED |
| CAI8047929.1 | |
| CAI8047930.1 | UNCHARACTERIZED |
| CAI8047932.1 | |
| CAI8047931.1 | |
| CAI8047933.1 | TYROSINE-PROTEIN KINASE |
| CAI8047935.1 | TYROSINE-PROTEIN KINASE |
| CAI8047934.1 | TYROSINE-PROTEIN KINASE |
| CAI8047936.1 | TYROSINE-PROTEIN KINASE |
| CAI8047937.1 | PROTEIN ENHANCER OF SEVENLESS 2B |
| CAI8047938.1 | PROTEIN ENHANCER OF SEVENLESS 2B |
| CAI8047939.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8047940.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8047943.1 | CAMK FAMILY PROTEIN KINASE |
| CAI8047942.1 | CAMK FAMILY PROTEIN KINASE |
| CAI8047941.1 | CAMK FAMILY PROTEIN KINASE |
| CAI8047944.1 | SERINE/THREONINE-PROTEIN KINASE NEK |
| CAI8047945.1 | NG5 |
| CAI8047946.1 | GABA-B RECEPTOR |
| CAI8047947.1 | |
| CAI8047948.1 | GABA-B RECEPTOR |
| CAI8047950.1 | |
| CAI8047949.1 | |
| CAI8047953.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8047954.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8047952.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8047955.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8047951.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8047956.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8047958.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8047957.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8047959.1 | |
| CAI8047960.1 | |
| CAI8047961.1 | |
| CAI8047963.1 | |
| CAI8047962.1 | |
| CAI8047964.1 | |
| CAI8047965.1 | |
| CAI8047966.1 | |
| CAI8047967.1 | |
| CAI8047968.1 | |
| CAI8047972.1 | LD44762P |
| CAI8047970.1 | LD44762P |
