About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8047771.1UDP-GLUCOSE 6-DEHYDROGENASE TUAD
CAI8047772.1NICKEL INSERTION PROTEIN-RELATED
CAI8047773.1NICKEL INSERTION PROTEIN-RELATED
CAI8047774.13-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE
CAI8047775.1GLYCERATE KINASE
CAI8047776.1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
CAI8047777.133 KDA CHAPERONIN
CAI8047778.133 KDA CHAPERONIN
CAI8047779.133 KDA CHAPERONIN
CAI8047780.13-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE
CAI8047781.1GLUTAMINE-TRNA LIGASE
CAI8047782.1GLUTAMATE--TRNA LIGASE
CAI8047783.1GLUTAMATE--TRNA LIGASE
CAI8047784.1GLUTAMATE--TRNA LIGASE
CAI8047785.1ZINC PHOSPHODIESTERASE ELAC PROTEIN 1
CAI8047786.1
CAI8047787.1
CAI8047788.1
CAI8047789.1
CAI8047790.1
CAI8047791.1
CAI8047793.1
CAI8047794.1
CAI8047792.1
CAI8047795.1
CAI8047796.1
CAI8047797.1
CAI8047798.1
CAI8047799.1SLR5058 PROTEIN
CAI8047806.1-
CAI8047805.1-
CAI8047803.1-
CAI8047802.1-
CAI8047801.1-
CAI8047800.1
CAI8047807.1-
CAI8047808.1-
CAI8047810.1-
CAI8047809.1-
CAI8047804.1-
CAI8047811.1KH DOMAIN CONTAINING RNA BINDING PROTEIN
CAI8047812.1KH DOMAIN CONTAINING RNA BINDING PROTEIN
CAI8047813.1KH DOMAIN CONTAINING RNA BINDING PROTEIN
CAI8047814.1
CAI8047815.1
CAI8047816.1
CAI8047817.1
CAI8047820.1
CAI8047819.1
CAI8047818.1
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