Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8047821.1 | |
| CAI8047822.1 | |
| CAI8047823.1 | |
| CAI8047824.1 | |
| CAI8047825.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10-RELATED |
| CAI8047826.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10-RELATED |
| CAI8047827.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10-RELATED |
| CAI8047828.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10-RELATED |
| CAI8047829.1 | |
| CAI8047830.1 | |
| CAI8047831.1 | |
| CAI8047832.1 | EPH RECEPTOR A5 |
| CAI8047833.1 | PROTEIN SIDEKICK |
| CAI8047834.1 | CYTOKINE RECEPTOR |
| CAI8047835.1 | |
| CAI8047837.1 | |
| CAI8047836.1 | |
| CAI8047838.1 | |
| CAI8047839.1 | REGULATOR OF G-PROTEIN SIGNALING LOCO |
| CAI8047840.1 | MACROPHAGE ERYTHROBLAST ATTACHER-RELATED |
| CAI8047841.1 | |
| CAI8047842.1 | UNCHARACTERIZED |
| CAI8047843.1 | UNCHARACTERIZED |
| CAI8047847.1 | UNCHARACTERIZED |
| CAI8047846.1 | POTASSIUM CHANNEL TETRAMERISATION DOMAIN CONTAINING PROTEIN |
| CAI8047845.1 | UNCHARACTERIZED |
| CAI8047844.1 | UNCHARACTERIZED |
| CAI8047848.1 | BETA-GALACTOSIDASE RELATED |
| CAI8047851.1 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
| CAI8047850.1 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
| CAI8047849.1 | |
| CAI8047853.1 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
| CAI8047852.1 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
| CAI8047854.1 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
| CAI8047856.1 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
| CAI8047855.1 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
| CAI8047857.1 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
| CAI8047860.1 | CHAPERONIN |
| CAI8047858.1 | CHAPERONIN |
| CAI8047859.1 | CHAPERONIN |
| CAI8047861.1 | CHAPERONIN |
| CAI8047862.1 | CHAPERONIN |
| CAI8047863.1 | CHAPERONIN |
| CAI8047865.1 | VESICLE PROTEIN SORTING-ASSOCIATED |
| CAI8047864.1 | ARYLSULFATASE FAMILY MEMBER |
| CAI8047866.1 | NITRIC OXIDE-ASSOCIATED PROTEIN 1 |
| CAI8047867.1 | NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 |
| CAI8047868.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8047869.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8 |
| CAI8047873.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
