Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8047872.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI8047871.1 | |
| CAI8047870.1 | |
| CAI8047874.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI8047875.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI8047880.1 | STAGA COMPLEX 65 SUBUNIT GAMMA |
| CAI8047877.1 | STAGA COMPLEX 65 SUBUNIT GAMMA |
| CAI8047876.1 | STAGA COMPLEX 65 SUBUNIT GAMMA |
| CAI8047878.1 | ADP-RIBOSYLGLYCOHYDROLASE |
| CAI8047879.1 | ADP-RIBOSYLGLYCOHYDROLASE |
| CAI8047881.1 | |
| CAI8047883.1 | |
| CAI8047884.1 | |
| CAI8047882.1 | |
| CAI8047887.1 | INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE |
| CAI8047886.1 | INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE |
| CAI8047885.1 | INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE |
| CAI8047888.1 | INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE |
| CAI8047889.1 | INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE |
| CAI8047890.1 | INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE |
| CAI8047892.1 | INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE |
| CAI8047891.1 | |
| CAI8047893.1 | INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE |
| CAI8047894.1 | INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE |
| CAI8047895.1 | ANILLIN/RHOTEKIN RTKN |
| CAI8047896.1 | ZINC FINGER CCHC DOMAIN-CONTAINING |
| CAI8047897.1 | |
| CAI8047902.1 | DEDICATOR OF CYTOKINESIS |
| CAI8047903.1 | DEDICATOR OF CYTOKINESIS |
| CAI8047901.1 | DEDICATOR OF CYTOKINESIS |
| CAI8047900.1 | DEDICATOR OF CYTOKINESIS |
| CAI8047899.1 | DEDICATOR OF CYTOKINESIS |
| CAI8047898.1 | DEDICATOR OF CYTOKINESIS |
| CAI8047904.1 | DEDICATOR OF CYTOKINESIS |
| CAI8047905.1 | DEDICATOR OF CYTOKINESIS |
| CAI8047906.1 | ASPARTATE AMINOTRANSFERASE |
| CAI8047907.1 | |
| CAI8047908.1 | |
| CAI8047909.1 | |
| CAI8047910.1 | |
| CAI8047912.1 | |
| CAI8047911.1 | |
| CAI8047913.1 | |
| CAI8047914.1 | |
| CAI8047915.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8047917.1 | PERICENTRIOLAR MATERIAL 1-RELATED |
| CAI8047916.1 | PERICENTRIOLAR MATERIAL 1-RELATED |
| CAI8047919.1 | UNCHARACTERIZED |
| CAI8047921.1 | UNCHARACTERIZED |
| CAI8047920.1 | UNCHARACTERIZED |
