About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8048021.1
CAI8048025.1
CAI8048024.1FIBROIN HEAVY CHAIN FIB-H LIKE PROTEIN
CAI8048023.1
CAI8048022.1
CAI8048027.1
CAI8048026.1
CAI8048028.1
CAI8048029.1THO2 PROTEIN
CAI8048030.1RAS-RELATED PROTEIN RAB
CAI8048031.1RAI16 PROTEIN-RELATED
CAI8048032.1RAI16 PROTEIN-RELATED
CAI8048034.1RAI16 PROTEIN-RELATED
CAI8048033.1RAI16 PROTEIN-RELATED
CAI8048035.1VACUOLAR PROTEIN SORTING 26 RELATED
CAI8048036.1DNA DAMAGE-INDUCIBLE APOPTOSIS SUPPRESSOR PROTEIN DDIAS
CAI8048037.1
CAI8048039.1
CAI8048038.1
CAI8048040.1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
CAI8048043.1
CAI8048042.1
CAI8048041.1
CAI8048044.1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
CAI8048045.1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
CAI8048046.1
CAI8048048.1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
CAI8048047.1
CAI8048050.1AMINO ACID TRANSPORTER
CAI8048049.1AMINO ACID TRANSPORTER
CAI8048051.1AMINO ACID TRANSPORTER
CAI8048052.1
CAI8048053.1
CAI8048054.1
CAI8048055.1
CAI8048057.1
CAI8048058.1
CAI8048056.1
CAI8048060.1
CAI8048062.1
CAI8048059.1
CAI8048061.1
CAI8048063.1
CAI8048064.1
CAI8048065.1
CAI8048066.1
CAI8048067.1EXOCYST COMPLEX COMPONENT 8
CAI8048070.1CYTOKINE RECEPTOR
CAI8048069.1CYTOKINE RECEPTOR
CAI8048068.1CYTOKINE RECEPTOR
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