Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8048121.1 | ENOYL-COA HYDRATASE |
| CAI8048122.1 | XYLOGLUCANASE (EUROFUNG) |
| CAI8048123.1 | COPPER AMINE OXIDASE |
| CAI8048124.1 | COPPER AMINE OXIDASE |
| CAI8048125.1 | |
| CAI8048126.1 | |
| CAI8048127.1 | 5-KETO-D-GLUCONATE 5-REDUCTASE |
| CAI8048128.1 | |
| CAI8048129.1 | CHOLINE MONOOXYGENASE, CHLOROPLASTIC |
| CAI8048130.1 | TRANSPOSASE |
| CAI8048131.1 | TRANSPOSASE |
| CAI8048132.1 | TRANSPOSASE |
| CAI8048133.1 | TRANSPOSASE |
| CAI8048134.1 | 4-CARBOXYMUCONOLACTONE DECARBOXYLASE FAMILY PROTEIN |
| CAI8048137.1 | AGAP011099-PA |
| CAI8048136.1 | AGAP011099-PA |
| CAI8048135.1 | AGAP011099-PA |
| CAI8048138.1 | AGAP011099-PA |
| CAI8048139.1 | AGAP011099-PA |
| CAI8048141.1 | AGAP011099-PA |
| CAI8048140.1 | MYOSIN |
| CAI8048146.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 17 |
| CAI8048145.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 17 |
| CAI8048144.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 17 |
| CAI8048143.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 17 |
| CAI8048142.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 17 |
| CAI8048148.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 17 |
| CAI8048147.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 17 |
| CAI8048149.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 17 |
| CAI8048150.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| CAI8048151.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| CAI8048158.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048157.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048153.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048154.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048155.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048156.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048152.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048160.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048161.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048164.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048163.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048165.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048162.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048159.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8048167.1 | EPH RECEPTOR A5 |
| CAI8048166.1 | EPH RECEPTOR A5 |
| CAI8048168.1 | EPH RECEPTOR A5 |
| CAI8048169.1 | EPH RECEPTOR A5 |
| CAI8048171.1 | WD REPEAT-CONTAINING PROTEIN POP1 |
