About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8047420.1SRCR DOMAIN-CONTAINING PROTEIN
CAI8047422.1LYSYL OXIDASE-LIKE-RELATED
CAI8047424.1SRCR DOMAIN-CONTAINING PROTEIN
CAI8047423.1SRCR DOMAIN-CONTAINING PROTEIN
CAI8047425.1SELENOPROTEIN O
CAI8047426.1
CAI8047427.1
CAI8047428.1
CAI8047429.1BLR3681 PROTEIN
CAI8047430.1
CAI8047431.1
CAI8047432.1COLLAGEN
CAI8047433.1
CAI8047434.1
CAI8047435.1
CAI8047440.1
CAI8047438.1
CAI8047437.1
CAI8047441.1
CAI8047443.1
CAI8047448.1
CAI8047442.1
CAI8047446.1
CAI8047447.1
CAI8047439.1
CAI8047445.1
CAI8047444.1
CAI8047436.1
CAI8047449.1
CAI8047450.1
CAI8047451.1
CAI8047452.1
CAI8047453.1IP13529P
CAI8047454.1IP13529P
CAI8047455.1IP13529P
CAI8047457.1
CAI8047456.1
CAI8047458.1
CAI8047459.1RUBRERYTHRIN
CAI8047460.1BLR3401 PROTEIN
CAI8047462.1CHOLINE MONOOXYGENASE, CHLOROPLASTIC
CAI8047461.1CHOLINE MONOOXYGENASE, CHLOROPLASTIC
CAI8047463.1CHOLINE MONOOXYGENASE, CHLOROPLASTIC
CAI8047464.1CHOLINE MONOOXYGENASE, CHLOROPLASTIC
CAI8047465.1
CAI8047466.1DNA MISMATCH REPAIR PROTEINS MUTS FAMILY DOMAIN-CONTAINING PROTEIN-RELATED
CAI8047467.1
CAI8047468.1NADP-DEPENDENT MALIC ENZYME
CAI8047469.1
CAI8047470.1DIHYDROXY-ACID DEHYDRATASE DAD
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