About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_1905-1.31
Bpl_scaf_1905-1.32FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS
Bpl_scaf_1905-2.0CEREBELLIN-RELATED
Bpl_scaf_1905-2.17CHROMOSOME 1 OPEN READING FRAME 112
Bpl_scaf_1905-2.19GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE
Bpl_scaf_1905-2.20HEAT SHOCK PROTEIN 70KDA
Bpl_scaf_1905-3.3CYTOSINE-SPECIFIC METHYLTRANSFERASE
Bpl_scaf_19053-0.15-
Bpl_scaf_19053-0.16
Bpl_scaf_19053-0.17
Bpl_scaf_19053-0.6
Bpl_scaf_19073-0.0E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Bpl_scaf_19073-0.2
Bpl_scaf_19073-0.26BONUS, ISOFORM C-RELATED
Bpl_scaf_19073-0.27BONUS, ISOFORM C-RELATED
Bpl_scaf_19073-0.28BONUS, ISOFORM C-RELATED
Bpl_scaf_19073-0.3BONUS, ISOFORM C-RELATED
Bpl_scaf_19073-0.7
Bpl_scaf_19081-0.10
Bpl_scaf_19081-0.16
Bpl_scaf_19081-0.18
Bpl_scaf_19097-0.0
Bpl_scaf_19107-0.2CRUMBS FAMILY MEMBER
Bpl_scaf_1911-0.0
Bpl_scaf_19112-0.0
Bpl_scaf_19112-1.12SOLUTE CARRIER FAMILY 5
Bpl_scaf_1912-0.5
Bpl_scaf_1912-0.7BONUS, ISOFORM C-RELATED
Bpl_scaf_19122-0.2GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Bpl_scaf_19122-1.5
Bpl_scaf_19132-0.0HISTONE H2B
Bpl_scaf_19132-0.1HISTONE H4
Bpl_scaf_19133-0.8PLEXIN
Bpl_scaf_19133-1.15POLYCYSTIN FAMILY MEMBER
Bpl_scaf_19133-1.19PROPERDIN
Bpl_scaf_19133-1.20
Bpl_scaf_19133-2.0CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_19133-3.4SULFIDE:QUINONE OXIDOREDUCTASE
Bpl_scaf_19133-4.11TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Bpl_scaf_19133-4.32
Bpl_scaf_19133-5.1
Bpl_scaf_19133-5.6DED DOMAIN-CONTAINING PROTEIN
Bpl_scaf_19133-6.25MULTI-COPPER OXIDASE
Bpl_scaf_19133-6.3GTP-BINDING PROTEIN ALPHA SUBUNIT
Bpl_scaf_19133-7.2
Bpl_scaf_19133-7.3PROTEASE M1 ZINC METALLOPROTEASE
Bpl_scaf_19133-8.5SACSIN
Bpl_scaf_19133-8.7
Bpl_scaf_19139-0.8ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Bpl_scaf_19139-0.9
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