About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_19188-0.1ATP-BINDING CASSETTE SUB-FAMILY C
Bpl_scaf_19189-0.2
Bpl_scaf_19191-0.3
Bpl_scaf_19194-0.0DYNACTIN 1-RELATED MICROTUBULE-BINDING
Bpl_scaf_19197-0.16
Bpl_scaf_19197-0.17SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_19197-0.18
Bpl_scaf_19197-0.19
Bpl_scaf_19197-0.20
Bpl_scaf_19197-0.6
Bpl_scaf_19197-0.9
Bpl_scaf_19197-1.11
Bpl_scaf_19197-1.13
Bpl_scaf_19197-2.1
Bpl_scaf_19197-2.19
Bpl_scaf_19197-2.24
Bpl_scaf_19197-2.26
Bpl_scaf_19197-2.27
Bpl_scaf_19197-2.31
Bpl_scaf_19197-2.32ZINC FINGER PROTEIN AEBP2
Bpl_scaf_19202-0.2ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
Bpl_scaf_19204-0.2
Bpl_scaf_19207-0.0YIPPEE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_1924-0.3PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5
Bpl_scaf_1925-0.16IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_1925-0.17NECTIN-RELATED
Bpl_scaf_1925-0.21NEPHRIN
Bpl_scaf_1925-1.11MICROSOMAL GLUTATHIONE S-TRANSFERASE 1
Bpl_scaf_1925-1.5UNCHARACTERIZED
Bpl_scaf_1925-1.6NADH-UBIQUINONE OXIDOREDUCTASE ASHI SUBUNIT
Bpl_scaf_1925-2.0
Bpl_scaf_1925-2.2
Bpl_scaf_1925-2.8GAMMA TUBULIN COMPLEX PROTEIN
Bpl_scaf_1925-3.14PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_1925-3.3ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_1925-3.5SPHINGOMYELIN SYNTHETASE
Bpl_scaf_1925-3.6
Bpl_scaf_1925-3.7PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_1925-4.12
Bpl_scaf_1925-4.13
Bpl_scaf_1925-4.14
Bpl_scaf_1925-4.19
Bpl_scaf_1930-0.1
Bpl_scaf_1930-0.4
Bpl_scaf_19360-0.10NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE
Bpl_scaf_19360-0.7NOP14
Bpl_scaf_19360-1.5NEUROPEPTIDE Y RECEPTOR
Bpl_scaf_19360-1.9
Bpl_scaf_19360-2.4
Bpl_scaf_19361-0.2TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
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