About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_18776-4.23ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_18776-4.24SYNTROPHIN
Bpl_scaf_18776-4.6
Bpl_scaf_18795-0.0
Bpl_scaf_18795-0.10
Bpl_scaf_18795-0.22
Bpl_scaf_18795-0.5
Bpl_scaf_18795-0.6POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Bpl_scaf_18801-0.8
Bpl_scaf_18801-0.9THAP DOMAIN PROTEIN
Bpl_scaf_18810-0.11
Bpl_scaf_18810-0.14IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_18810-0.4PROPERDIN
Bpl_scaf_18820-0.0CEREBELLIN-RELATED
Bpl_scaf_18840-0.0
Bpl_scaf_18852-0.2
Bpl_scaf_18865-0.5
Bpl_scaf_18878-0.3ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL
Bpl_scaf_18878-0.5ANTIGEN BSP, PUTATIVE-RELATED
Bpl_scaf_18892-0.0
Bpl_scaf_18892-0.1
Bpl_scaf_18892-0.6
Bpl_scaf_18893-0.0
Bpl_scaf_18893-0.3
Bpl_scaf_18893-0.6ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Bpl_scaf_18893-1.5C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED
Bpl_scaf_18893-1.6FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)
Bpl_scaf_18893-2.12UPF0728 PROTEIN C10ORF53
Bpl_scaf_18893-2.3IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED
Bpl_scaf_18893-2.937S RIBOSOMAL PROTEIN S26, MITOCHONDRIAL
Bpl_scaf_18893-3.22CENTROSOMAL PROTEIN CEP135
Bpl_scaf_18893-3.23CENTROSOMAL PROTEIN CEP135
Bpl_scaf_18893-3.6MYOSIN HEAVY CHAIN, NON-MUSCLE
Bpl_scaf_18893-4.11TUBULIN
Bpl_scaf_18893-4.53TUBULIN
Bpl_scaf_18893-4.6TUBULIN
Bpl_scaf_18893-5.11TUBULIN
Bpl_scaf_18893-5.7TUBULIN
Bpl_scaf_18893-5.8TUBULIN
Bpl_scaf_18893-5.88TUBULIN
Bpl_scaf_18900-0.0
Bpl_scaf_18900-0.1
Bpl_scaf_18900-0.4
Bpl_scaf_18900-0.8REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
Bpl_scaf_1891-0.1260S RIBOSOMAL PROTEIN L12
Bpl_scaf_1891-0.7SPLICING FACTOR 3B
Bpl_scaf_1891-1.15
Bpl_scaf_1891-1.16
Bpl_scaf_1891-1.19UNCHARACTERIZED
Bpl_scaf_1891-1.6MRNA EXPORT FACTOR AND BUB3
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