About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_18613-7.16
Bpl_scaf_18613-8.10HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE
Bpl_scaf_18613-8.5NOP SEVEN ASSOCIATED PROTEIN 1
Bpl_scaf_18613-8.9
Bpl_scaf_18613-9.4RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Bpl_scaf_18613-9.5MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 1
Bpl_scaf_18618-0.014-3-3 PROTEIN
Bpl_scaf_18623-1.0ATP-DEPENDENT DNA HELICASE
Bpl_scaf_18623-1.13
Bpl_scaf_18623-2.2ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Bpl_scaf_18623-2.8
Bpl_scaf_18623-3.0
Bpl_scaf_18623-3.17
Bpl_scaf_18623-3.18
Bpl_scaf_18623-3.3
Bpl_scaf_18624-0.2
Bpl_scaf_18625-0.0
Bpl_scaf_18633-0.1
Bpl_scaf_18634-0.0
Bpl_scaf_18634-0.3
Bpl_scaf_18634-1.34PROPERDIN
Bpl_scaf_18634-2.6PROPERDIN
Bpl_scaf_18634-2.7
Bpl_scaf_18635-0.4RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_18638-0.4
Bpl_scaf_18645-0.1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Bpl_scaf_18645-1.5ANKYRIN REPEAT FAMILY PROTEIN
Bpl_scaf_18645-1.9ANKYRIN REPEAT-CONTAINING
Bpl_scaf_18645-10.8
Bpl_scaf_18645-11.11
Bpl_scaf_18645-11.12SOLUTE CARRIER FAMILY 2
Bpl_scaf_18645-11.15
Bpl_scaf_18645-11.17
Bpl_scaf_18645-2.10PERIOD CIRCADIAN PROTEIN
Bpl_scaf_18645-4.4PROTEIN CBG04600
Bpl_scaf_18645-5.11WD-40 REPEAT PROTEIN
Bpl_scaf_18645-5.12PDZ AND LIM DOMAIN PROTEIN ZASP
Bpl_scaf_18645-5.8PSEUDOURIDYLATE SYNTHASE
Bpl_scaf_18645-6.1VOLTAGE-GATED POTASSIUM CHANNEL
Bpl_scaf_18645-7.0
Bpl_scaf_18645-8.9CATION-TRANSPORTING ATPASE-RELATED
Bpl_scaf_18645-9.3ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Bpl_scaf_18647-0.0CEREBELLIN-RELATED
Bpl_scaf_18651-0.2
Bpl_scaf_18652-0.0
Bpl_scaf_18653-0.0VOLTAGE-GATED POTASSIUM CHANNEL
Bpl_scaf_18653-0.2
Bpl_scaf_18653-0.9
Bpl_scaf_18654-0.3CEREBELLIN-RELATED
Bpl_scaf_18655-1.1
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