About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_18033-0.10NB-ARC AND TPR DOMAIN PROTEIN
Bpl_scaf_18033-0.11
Bpl_scaf_18046-0.2PR DOMAIN ZINC FINGER PROTEIN
Bpl_scaf_18046-0.4VASCULIN
Bpl_scaf_18046-1.7TRANSCRIPTION ELONGATION FACTOR A
Bpl_scaf_18046-1.8TGF-BETA FAMILY
Bpl_scaf_18046-1.9PROTEIN FAM91A1
Bpl_scaf_18046-2.10
Bpl_scaf_18046-2.11
Bpl_scaf_18046-2.13
Bpl_scaf_18046-2.3CEREBELLIN-RELATED
Bpl_scaf_18046-2.9BLR6086 PROTEIN
Bpl_scaf_18046-3.0
Bpl_scaf_18046-3.1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_18046-4.43BONUS, ISOFORM C-RELATED
Bpl_scaf_18046-4.49VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_18046-4.53VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_18046-4.54
Bpl_scaf_18046-4.56VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_18061-0.3RETROVIRAL-LIKE ASPARTIC PROTEASE 1
Bpl_scaf_18061-0.5
Bpl_scaf_1807-0.1DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_1807-0.10
Bpl_scaf_1807-0.5
Bpl_scaf_1807-1.13ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
Bpl_scaf_1807-1.14
Bpl_scaf_1807-1.15
Bpl_scaf_1807-1.16
Bpl_scaf_1807-1.17
Bpl_scaf_1807-1.18
Bpl_scaf_1807-1.25
Bpl_scaf_18075-0.0
Bpl_scaf_18087-0.1
Bpl_scaf_18092-0.7TUBULIN-SPECIFIC CHAPERONE E
Bpl_scaf_18092-0.8U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN
Bpl_scaf_18101-0.7ATP-DEPENDENT DNA HELICASE
Bpl_scaf_18108-0.2
Bpl_scaf_18128-0.4
Bpl_scaf_18141-0.5TRANSMEMBRANE PROTEIN HTP-1 RELATED
Bpl_scaf_18141-0.6
Bpl_scaf_18147-0.4APOLIPOPROTEIN L
Bpl_scaf_18163-0.4
Bpl_scaf_18163-0.7CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_18163-0.9OS10G0105400 PROTEIN
Bpl_scaf_18171-0.9RIBOSOMAL PROTEIN S6 KINASE
Bpl_scaf_18182-0.5
Bpl_scaf_18182-0.6
Bpl_scaf_18191-0.10SI:CH211-175M2.5
Bpl_scaf_18191-0.15RMLC-LIKE JELLY ROLL FOLD PROTEIN
Bpl_scaf_18191-0.16SOLUTE CARRIER FAMILY 22 MEMBER
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