About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_18444-0.0GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Bpl_scaf_18444-0.280 KDA MCM3-ASSOCIATED PROTEIN
Bpl_scaf_18444-1.10AMMONIUM TRANSPORTER
Bpl_scaf_18444-1.14CRUMBS FAMILY MEMBER
Bpl_scaf_18444-1.16ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_18444-1.5CRUMBS FAMILY MEMBER
Bpl_scaf_18449-0.0
Bpl_scaf_18449-0.1
Bpl_scaf_1845-0.2
Bpl_scaf_18450-0.1
Bpl_scaf_18461-0.1
Bpl_scaf_18461-0.3
Bpl_scaf_18461-0.4
Bpl_scaf_18461-1.16THYROTROPH EMBRYONIC FACTOR RELATED
Bpl_scaf_18461-1.20TRANSMEMBRANE PROTEIN
Bpl_scaf_18461-1.21NISCHARIN RELATED
Bpl_scaf_18461-1.22NADH-UBIQUINONE OXIDOREDUCTASE
Bpl_scaf_18461-1.32DOPAMINE BETA HYDROXYLASE RELATED
Bpl_scaf_18464-0.0
Bpl_scaf_18467-0.1
Bpl_scaf_18473-0.0TRYPTOPHANYL-TRNA SYNTHETASE
Bpl_scaf_18476-0.0KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
Bpl_scaf_18476-1.1250S RIBOSOMAL PROTEIN L9
Bpl_scaf_18476-1.13CHITIN SYNTHASE
Bpl_scaf_18476-1.16
Bpl_scaf_18476-2.10CHITIN SYNTHASE
Bpl_scaf_18476-2.12CHITIN SYNTHASE
Bpl_scaf_18476-2.7AGAP005574-PA
Bpl_scaf_18481-0.4
Bpl_scaf_18482-0.4
Bpl_scaf_18484-0.14
Bpl_scaf_18484-0.15HELIX LOOP HELIX PROTEIN 21-RELATED
Bpl_scaf_18484-0.19EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_18484-0.20
Bpl_scaf_18484-1.0SOLUTE CARRIER FAMILY 22 MEMBER
Bpl_scaf_18484-1.3
Bpl_scaf_18484-2.18
Bpl_scaf_18484-2.19SIDESTEP PROTEIN
Bpl_scaf_1849-0.0
Bpl_scaf_1850-0.3-
Bpl_scaf_18501-0.2
Bpl_scaf_18501-0.9
Bpl_scaf_18501-1.6
Bpl_scaf_18508-0.15
Bpl_scaf_18508-0.21
Bpl_scaf_18508-0.23
Bpl_scaf_18508-1.5INTERFERON REGULATORY FACTOR
Bpl_scaf_18508-1.6DUAL SPECIFICITY PROTEIN PHOSPHATASE DDB_G0269404-RELATED
Bpl_scaf_18508-2.12N-MYC DOWNSTREAM REGULATED
Bpl_scaf_18508-2.26TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER
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