About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_17888-3.49
Bpl_scaf_17888-3.50
Bpl_scaf_17888-3.51
Bpl_scaf_17889-0.0GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Bpl_scaf_1789-0.0PIKACHURIN-LIKE PROTEIN
Bpl_scaf_17890-0.3SUGAR HYDROLASE-RELATED
Bpl_scaf_17891-0.0
Bpl_scaf_17892-0.3
Bpl_scaf_17893-0.9
Bpl_scaf_17899-0.3
Bpl_scaf_17899-0.8TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_17899-1.15
Bpl_scaf_17899-1.2TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_17899-1.4EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Bpl_scaf_17899-3.11APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Bpl_scaf_17899-3.14PROPERDIN
Bpl_scaf_17899-3.28EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Bpl_scaf_17899-3.34METHIONINE SYNTHASE
Bpl_scaf_17899-4.10HOMEOBOX-DDT DOMAIN PROTEIN RLT2
Bpl_scaf_17899-4.6
Bpl_scaf_17899-4.7
Bpl_scaf_17899-4.8LEUCINE RICH REPEAT FAMILY PROTEIN
Bpl_scaf_1790-0.3
Bpl_scaf_17915-0.0
Bpl_scaf_17925-0.11SERINE / THREONINE RACEMASE FAMILY MEMBER
Bpl_scaf_17936-0.1
Bpl_scaf_17948-0.0TRANSMEMBRANE PROTEIN 246
Bpl_scaf_17958-0.0
Bpl_scaf_17974-0.1
Bpl_scaf_17974-0.8ISTHMIN-2
Bpl_scaf_17989-0.0
Bpl_scaf_17989-0.3
Bpl_scaf_1799-0.2SRC-ASSOCIATED ADAPTOR PROTEIN
Bpl_scaf_1799-1.11
Bpl_scaf_1799-1.22BAX INHIBITOR-RELATED
Bpl_scaf_1799-1.24MYOSIN LIGHT CHAIN 1, 3
Bpl_scaf_1799-1.28
Bpl_scaf_1799-1.29REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_1799-1.30MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Bpl_scaf_1799-1.31
Bpl_scaf_1799-1.33
Bpl_scaf_1799-1.34
Bpl_scaf_17990-1.0
Bpl_scaf_17990-2.8BONUS, ISOFORM C-RELATED
Bpl_scaf_17990-3.2
Bpl_scaf_17990-3.7BONUS, ISOFORM C-RELATED
Bpl_scaf_17990-4.0
Bpl_scaf_17990-4.2
Bpl_scaf_18004-0.5OLIGORIBONUCLEASE, MITOCHONDRIAL
Bpl_scaf_18020-0.7
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