About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_18191-0.9
Bpl_scaf_18204-0.0HEH2P
Bpl_scaf_18204-0.1
Bpl_scaf_18204-0.2
Bpl_scaf_18204-0.5
Bpl_scaf_18213-0.1
Bpl_scaf_18213-0.3
Bpl_scaf_18213-0.5SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_18213-0.6PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_18232-0.10IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
Bpl_scaf_18232-0.13CEREBELLIN-RELATED
Bpl_scaf_18238-0.12RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Bpl_scaf_18238-0.23
Bpl_scaf_18238-0.26UNCHARACTERIZED
Bpl_scaf_1824-0.3
Bpl_scaf_18247-0.10PERIOSTIN-RELATED
Bpl_scaf_18247-0.11
Bpl_scaf_1825-0.0
Bpl_scaf_18256-0.12
Bpl_scaf_18272-0.6
Bpl_scaf_18289-0.33RNA METHYLASE-RELATED
Bpl_scaf_18289-0.76ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_18289-0.77
Bpl_scaf_18289-0.78ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_18299-0.10POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Bpl_scaf_18299-0.11HSD9
Bpl_scaf_18299-0.20RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN
Bpl_scaf_18299-0.5BETA-1,4-GALACTOSYLTRANSFERASE
Bpl_scaf_18299-0.9UNCHARACTERIZED
Bpl_scaf_1831-0.12
Bpl_scaf_1831-0.13
Bpl_scaf_1831-0.3SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_1831-0.6SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_1831-1.0
Bpl_scaf_1831-1.26THAP DOMAIN-CONTAINING
Bpl_scaf_1831-1.7OLIGORIBONUCLEASE, MITOCHONDRIAL
Bpl_scaf_18311-0.11
Bpl_scaf_18311-0.12HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER
Bpl_scaf_18311-0.7TYROSINASE FAMILY MEMBER
Bpl_scaf_1832-0.3
Bpl_scaf_18323-0.4CELL CYCLE CONTROL PROTEIN CWF22-RELATED
Bpl_scaf_18323-0.5
Bpl_scaf_1833-0.3THAP DOMAIN-CONTAINING
Bpl_scaf_18337-0.2
Bpl_scaf_18337-0.20TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_18337-0.21
Bpl_scaf_18337-0.22BONUS, ISOFORM C-RELATED
Bpl_scaf_18337-0.4
Bpl_scaf_18337-0.5BONUS, ISOFORM C-RELATED
Bpl_scaf_18349-0.12SEGMENTATION PROTEIN EVEN-SKIPPED
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