About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_18517-0.4
Bpl_scaf_18519-1.3FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_18519-2.10FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_18519-2.13FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_18519-2.15FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_18519-2.27FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_1852-0.0
Bpl_scaf_1852-0.3
Bpl_scaf_1853-0.0
Bpl_scaf_1856-1.17
Bpl_scaf_1856-1.8GOLGI REASSEMBLY STACKING PROTEIN GRASP
Bpl_scaf_1856-1.9CHITIN SYNTHASE
Bpl_scaf_1856-2.13ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Bpl_scaf_1856-2.14
Bpl_scaf_1856-2.15BRYOPORIN
Bpl_scaf_1859-0.2
Bpl_scaf_1861-0.1
Bpl_scaf_18612-0.16
Bpl_scaf_18612-0.6ARP2/3 COMPLEX 21 KD SUBUNIT
Bpl_scaf_18612-0.7
Bpl_scaf_18612-0.8FLOTILLIN-RELATED
Bpl_scaf_18613-0.1
Bpl_scaf_18613-0.4
Bpl_scaf_18613-1.11NY-REN-41 ANTIGEN L15 -RELATED
Bpl_scaf_18613-1.6ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Bpl_scaf_18613-10.3GEMIN2
Bpl_scaf_18613-10.4SPERM PROTEIN HOMOLOG
Bpl_scaf_18613-11.14SPLICING FACTOR 3B, SUBUNIT 1-RELATED
Bpl_scaf_18613-11.15OXIDOREDUCTASE NAD-BINDING DOMAIN-CONTAINING PROTEIN 1
Bpl_scaf_18613-11.16CBF1 INTERACTING COREPRESSOR CIR
Bpl_scaf_18613-11.17
Bpl_scaf_18613-14.2
Bpl_scaf_18613-15.5SODIUM/NUCLEOSIDE COTRANSPORTER
Bpl_scaf_18613-16.10ABC TRANSPORTER B FAMILY
Bpl_scaf_18613-16.9BLR2807 PROTEIN
Bpl_scaf_18613-2.12APOLIPOPROTEIN L
Bpl_scaf_18613-2.13GATOR COMPLEX PROTEIN WDR24
Bpl_scaf_18613-2.16
Bpl_scaf_18613-2.17DYNEIN HEAVY CHAIN
Bpl_scaf_18613-4.13BOULE-RELATED
Bpl_scaf_18613-4.14DYNEIN HEAVY CHAIN
Bpl_scaf_18613-5.0
Bpl_scaf_18613-5.19
Bpl_scaf_18613-5.5ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Bpl_scaf_18613-5.6L1 TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_18613-5.8STEROL DESATURASE
Bpl_scaf_18613-6.1
Bpl_scaf_18613-7.13DIABLO HOMOLOG, MITOCHONDRIAL
Bpl_scaf_18613-7.14
Bpl_scaf_18613-7.15MONOCARBOXYLATE TRANSPORTER
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