About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_19391-0.0APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Bpl_scaf_19402-0.6PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_19417-0.3ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_19425-0.7PTD012 PROTEIN
Bpl_scaf_19425-0.9ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_19429-0.0PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Bpl_scaf_19437-0.0
Bpl_scaf_1944-0.6UNCHARACTERIZED
Bpl_scaf_19457-0.1TUMOR ENDOTHELIAL MARKER 7 RELATED
Bpl_scaf_19466-0.0
Bpl_scaf_19466-0.3EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_19482-0.2AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Bpl_scaf_19489-0.5ALPHA CATENIN
Bpl_scaf_19490-0.4SUGAR TRANSPORTER
Bpl_scaf_19490-0.7
Bpl_scaf_19490-1.8SODIUM CHANNEL MODIFIER 1
Bpl_scaf_19490-1.9PHD FINGER PROTEIN
Bpl_scaf_19490-2.10
Bpl_scaf_19490-2.30CCR4-NOT TRANSCRIPTION COMPLEX RELATED
Bpl_scaf_19490-2.31TUBULIN
Bpl_scaf_19490-3.0
Bpl_scaf_19490-4.1G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_19503-0.7
Bpl_scaf_19503-0.8
Bpl_scaf_19513-0.4
Bpl_scaf_19541-0.2UNCHARACTERIZED
Bpl_scaf_19550-0.0
Bpl_scaf_19550-0.4
Bpl_scaf_19571-0.5SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_19581-0.11
Bpl_scaf_19600-0.5
Bpl_scaf_19600-0.7
Bpl_scaf_19600-0.8OTU DOMAIN CONTAINING PROTEIN
Bpl_scaf_19608-0.1
Bpl_scaf_19608-0.10CHYMOTRYPSIN-RELATED
Bpl_scaf_19627-0.3PROPERDIN
Bpl_scaf_19627-0.5CRUMBS FAMILY MEMBER
Bpl_scaf_19637-0.10
Bpl_scaf_19637-0.11
Bpl_scaf_19637-0.7
Bpl_scaf_19638-1.1
Bpl_scaf_19638-2.3G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_19638-3.6
Bpl_scaf_19638-3.8THAP DOMAIN PROTEIN
Bpl_scaf_19638-4.3B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Bpl_scaf_19638-5.1
Bpl_scaf_19638-5.9FORKHEAD BOX PROTEIN J1
Bpl_scaf_19641-0.0
Bpl_scaf_19641-0.10VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_19657-0.6POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
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