About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_19657-0.9PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
Bpl_scaf_19669-0.0
Bpl_scaf_19669-0.10MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_19669-0.16PEPTIDYL-TRNA HYDROLASE
Bpl_scaf_19670-0.11DESMOGLEIN FAMILY MEMBER
Bpl_scaf_19670-1.3PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
Bpl_scaf_19670-3.4SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Bpl_scaf_19670-3.9OXIDOREDUCTASE GLYR1-RELATED
Bpl_scaf_19670-4.2SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED
Bpl_scaf_19670-4.3TRANSMEMBRANE PROTEIN 33
Bpl_scaf_19670-5.0DACHSHUND
Bpl_scaf_19670-5.8MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B
Bpl_scaf_19670-5.9MULTI-COPPER OXIDASE
Bpl_scaf_19671-0.3
Bpl_scaf_19671-1.10ALPHA-MANNOSIDASE
Bpl_scaf_19671-1.5
Bpl_scaf_19671-1.9SYNTAXIN
Bpl_scaf_19671-10.2PROTEIN STAR
Bpl_scaf_19671-11.1
Bpl_scaf_19671-11.6
Bpl_scaf_19671-12.1
Bpl_scaf_19671-12.10
Bpl_scaf_19671-12.12
Bpl_scaf_19671-12.2
Bpl_scaf_19671-12.6PROTEIN STAR
Bpl_scaf_19671-12.9
Bpl_scaf_19671-13.0
Bpl_scaf_19671-13.1
Bpl_scaf_19671-13.12
Bpl_scaf_19671-13.2
Bpl_scaf_19671-2.0TOLL-LIKE RECEPTOR
Bpl_scaf_19671-4.7STEROL DESATURASE-RELATED PROTEIN
Bpl_scaf_19671-4.8OPSIN
Bpl_scaf_19671-5.4AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN
Bpl_scaf_19671-6.5CHARGED MULTIVESICULAR BODY PROTEIN
Bpl_scaf_19671-6.6PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS X PROTEIN
Bpl_scaf_19671-6.7NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF
Bpl_scaf_19671-7.10WD-40 REPEAT PROTEIN
Bpl_scaf_19671-7.9RIBONUCLEASE P SUBUNIT P21
Bpl_scaf_19671-8.0MIP08469P
Bpl_scaf_19671-8.1
Bpl_scaf_19671-9.10
Bpl_scaf_19671-9.23
Bpl_scaf_19671-9.25
Bpl_scaf_19671-9.4
Bpl_scaf_19671-9.8
Bpl_scaf_19696-0.1SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_1970-0.7
Bpl_scaf_1970-0.8BONUS, ISOFORM C-RELATED
Bpl_scaf_19702-0.4
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