About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_1989-1.2N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
Bpl_scaf_1989-1.5N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
Bpl_scaf_1989-10.3
Bpl_scaf_1989-10.5CARBONIC ANHYDRASE
Bpl_scaf_1989-11.5
Bpl_scaf_1989-12.14THO2 PROTEIN
Bpl_scaf_1989-12.16UNCHARACTERIZED
Bpl_scaf_1989-12.43ARFAPTIN-RELATED
Bpl_scaf_1989-12.46ZINC FINGER AND SCAN DOMAIN-CONTAINING
Bpl_scaf_1989-2.13
Bpl_scaf_1989-2.6
Bpl_scaf_1989-2.9SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Bpl_scaf_1989-3.4SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Bpl_scaf_1989-4.3
Bpl_scaf_1989-4.8TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 11A
Bpl_scaf_1989-5.6
Bpl_scaf_1989-6.15
Bpl_scaf_1989-6.16MUCIN 4-RELATED
Bpl_scaf_1989-6.17
Bpl_scaf_1989-6.21TNFR-CYS DOMAIN-CONTAINING PROTEIN
Bpl_scaf_1989-7.3SOLUTE CARRIER FAMILY 10 MEMBER 7
Bpl_scaf_1989-7.7TNFR-CYS DOMAIN-CONTAINING PROTEIN
Bpl_scaf_1989-7.9RING FINGER PROTEIN 219
Bpl_scaf_1989-8.11
Bpl_scaf_1989-8.16NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_1989-8.17
Bpl_scaf_1989-8.31
Bpl_scaf_1989-8.33
Bpl_scaf_1989-8.37IMIDAZOLONEPROPIONASE
Bpl_scaf_1989-9.6
Bpl_scaf_19890-0.0MULTI-COPPER OXIDASE
Bpl_scaf_19892-0.1
Bpl_scaf_19895-0.5
Bpl_scaf_19895-1.16ATP-DEPENDENT CLP PROTEASE
Bpl_scaf_19895-1.19GLUCOSAMINE-6-PHOSPHATE ISOMERASE
Bpl_scaf_19895-1.21UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Bpl_scaf_19895-1.54OS01G0282866 PROTEIN
Bpl_scaf_19895-1.55TUBULIN
Bpl_scaf_19895-1.9
Bpl_scaf_19904-0.2
Bpl_scaf_19909-0.17COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
Bpl_scaf_19909-1.11
Bpl_scaf_19909-1.18UNCHARACTERIZED
Bpl_scaf_19909-1.19UBIQUITIN-CONJUGATING ENZYME E2
Bpl_scaf_19909-1.28
Bpl_scaf_19909-1.32UNCHARACTERIZED
Bpl_scaf_19909-1.5PHOSPHOLIPID SCRAMBLASE-RELATED
Bpl_scaf_19919-0.0
Bpl_scaf_19920-0.10SERINE PROTEASE
Bpl_scaf_19920-0.13UPSET, ISOFORM A
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