About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_20063-1.14
Bpl_scaf_20063-2.11
Bpl_scaf_20063-2.24
Bpl_scaf_20063-2.4ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_20063-2.5UNCHARACTERIZED
Bpl_scaf_20063-2.9
Bpl_scaf_20063-3.6ATP-DEPENDENT DNA HELICASE
Bpl_scaf_20063-4.18POLY [ADP-RIBOSE] POLYMERASE
Bpl_scaf_20063-4.19
Bpl_scaf_20063-4.20NADP-SPECIFIC ISOCITRATE DEHYDROGENASE
Bpl_scaf_20063-4.21KELCH PROTEIN
Bpl_scaf_20063-4.30CENTROMERE PROTEIN E
Bpl_scaf_20063-4.5SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Bpl_scaf_20064-0.3
Bpl_scaf_20064-1.14OXIDASE/PEROXIDASE
Bpl_scaf_20064-1.4
Bpl_scaf_20064-1.5
Bpl_scaf_20064-1.6
Bpl_scaf_20064-1.7AGAP001331-PA-RELATED
Bpl_scaf_20065-0.3
Bpl_scaf_20065-0.5MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A
Bpl_scaf_20065-0.7UNCHARACTERIZED
Bpl_scaf_20065-1.5WD REPEAT-CONTAINING PROTEIN 27
Bpl_scaf_20065-2.10GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED
Bpl_scaf_20065-2.4G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_20066-0.1
Bpl_scaf_20072-0.4CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Bpl_scaf_20073-0.2BETA TRANSDUCIN-RELATED PROTEIN
Bpl_scaf_20074-0.2
Bpl_scaf_20076-0.140S RIBOSOMAL PROTEIN S8
Bpl_scaf_20076-1.1OS03G0233200 PROTEIN
Bpl_scaf_20076-2.10UNCHARACTERIZED
Bpl_scaf_20076-2.13EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
Bpl_scaf_20076-3.2
Bpl_scaf_20076-3.7
Bpl_scaf_20077-0.4ANKYRIN REPEAT-CONTAINING
Bpl_scaf_20078-0.6G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_20081-0.0
Bpl_scaf_20082-0.3MULTICOPPER OXIDASE-RELATED
Bpl_scaf_20083-0.4ADHESION G PROTEIN-COUPLED RECEPTOR G7
Bpl_scaf_20086-1.0BONUS, ISOFORM C-RELATED
Bpl_scaf_20086-1.1
Bpl_scaf_20086-1.14CADHERIN-87A
Bpl_scaf_20086-1.18HEAT SHOCK PROTEIN HSP-12.2-RELATED
Bpl_scaf_20086-1.9ZGC:195170
Bpl_scaf_20086-3.0
Bpl_scaf_20086-3.7CADHERIN-87A
Bpl_scaf_20091-0.5UNCHARACTERIZED
Bpl_scaf_20091-0.6
Bpl_scaf_20104-0.0
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