About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_20376-11.0
Bpl_scaf_20376-11.2
Bpl_scaf_20376-11.21
Bpl_scaf_20376-11.9
Bpl_scaf_20376-12.11
Bpl_scaf_20376-12.2
Bpl_scaf_20376-12.4
Bpl_scaf_20376-13.10THIOESTERASE 1/PROTEASE 1/LYSOPHOSPHOLIPASE L1
Bpl_scaf_20376-13.11
Bpl_scaf_20376-14.10REGULATOR OF MICROTUBULE DYNAMICS PROTEIN
Bpl_scaf_20376-14.11DNA LIGASE
Bpl_scaf_20376-14.18GTP CYCLOHYDROLASE 1 FEEDBACK REGULATORY PROTEIN
Bpl_scaf_20376-14.19DNA LIGASE
Bpl_scaf_20376-14.5
Bpl_scaf_20376-14.8MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_20376-2.3RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_20376-2.6
Bpl_scaf_20376-3.6P140CAP/SNIP-RELATED
Bpl_scaf_20376-4.10
Bpl_scaf_20376-4.5ARP2/3 COMPLEX 34 KDA SUBUNIT
Bpl_scaf_20376-4.6CYTOSOLIC PHOSPHOLIPASE A2
Bpl_scaf_20376-5.15ZINC FINGER PROTEIN 622
Bpl_scaf_20376-5.16DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER
Bpl_scaf_20376-5.17RAC GTPASE-ACTIVATING PROTEIN 1
Bpl_scaf_20376-5.1860S RIBOSOMAL PROTEIN L37A
Bpl_scaf_20376-7.11PEPTIDOGLYCAN RECOGNITION PROTEIN
Bpl_scaf_20376-8.3
Bpl_scaf_20376-8.4
Bpl_scaf_20376-8.8
Bpl_scaf_20376-9.3
Bpl_scaf_20376-9.4
Bpl_scaf_20380-0.0
Bpl_scaf_20380-0.10
Bpl_scaf_20380-0.11BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 1
Bpl_scaf_20380-0.16
Bpl_scaf_20380-0.18INHIBITOR OF APOPTOSIS
Bpl_scaf_20380-0.5
Bpl_scaf_20389-0.1
Bpl_scaf_20389-0.5REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_20398-0.0
Bpl_scaf_20398-0.13
Bpl_scaf_20398-0.14
Bpl_scaf_20398-0.15RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_20422-0.2
Bpl_scaf_20422-0.8MYOTROPHIN
Bpl_scaf_20422-0.9SLR5058 PROTEIN
Bpl_scaf_20435-0.1OPSIN
Bpl_scaf_20435-0.13
Bpl_scaf_2044-0.6SH3 DOMAIN-CONTAINING
Bpl_scaf_2044-0.7JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE
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