Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Bathynomus jamesi | Arthropoda | - | Hydrothermal vent | 898 | near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E) | 1955234 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM2301448v1 | 5.89Gb | Contig | 2022 | JAJOZX01 | Institute of Oceanology, Chinese Academy of Sciences | PRJNA776076 | 94.80% | 23,221 |
Title | Journal | Pubmed ID |
---|---|---|
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environment | BMC Biology | 35562825 |
Gene ID | Description |
---|---|
mRNA.BJAM.TU.10063 | 50S/60S RIBOSOMAL PROTEIN L16 |
mRNA.BJAM.TU.10083 | REGULATORY-ASSOCIATED PROTEIN OF MTOR |
mRNA.BJAM.TU.10093 | ATP SYNTHASE SUBUNIT |
mRNA.BJAM.TU.10094 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM70 |
mRNA.BJAM.TU.10097 | ATP-DEPENDENT CLP PROTEASE |
mRNA.BJAM.TU.10098 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
mRNA.BJAM.TU.10194 | DNA TOPOISOMERASE/GYRASE |
mRNA.BJAM.TU.10204 | TRANSLATION ELONGATION FACTOR-RELATED |
mRNA.BJAM.TU.10208 | |
mRNA.BJAM.TU.10209 | GLYCINE N-METHYLTRANSFERASE |
mRNA.BJAM.TU.10265 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 |
mRNA.BJAM.TU.10266 | PROTEIN TFG |
mRNA.BJAM.TU.10346 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
mRNA.BJAM.TU.10450 | RED PROTEIN IK FACTOR CYTOKINE IK |
mRNA.BJAM.TU.10451 | ORF PROTEIN |
mRNA.BJAM.TU.10496 | PESCADILLO - RELATED |
mRNA.BJAM.TU.10499 | RIBOSOMAL PROTEIN L27 |
mRNA.BJAM.TU.10690 | COPINE |
mRNA.BJAM.TU.10694 | TRNA MODIFICATION GTPASE GTPBP3 |
mRNA.BJAM.TU.10695 | COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER |
mRNA.BJAM.TU.10719 | D-DOPACHROME DECARBOXYLASE |
mRNA.BJAM.TU.10720 | UNCHARACTERIZED |
mRNA.BJAM.TU.10865 | |
mRNA.BJAM.TU.1103 | SERINE/THREONINE-PROTEIN KINASE |
mRNA.BJAM.TU.11093 | |
mRNA.BJAM.TU.11389 | FROUNT PROTEIN-RELATED |
mRNA.BJAM.TU.11597 | TUBULIN |
mRNA.BJAM.TU.11598 | TUBULIN |
mRNA.BJAM.TU.1161 | IMPACT-RELATED |
mRNA.BJAM.TU.11715 | SULFOTRANSFERASE SULT |
mRNA.BJAM.TU.11737 | |
mRNA.BJAM.TU.11859 | |
mRNA.BJAM.TU.11868 | PROTEIN TAR1 |
mRNA.BJAM.TU.11869 | PROTEIN TAR1 |
mRNA.BJAM.TU.11873 | |
mRNA.BJAM.TU.11910 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
mRNA.BJAM.TU.11919 | INNEXIN |
mRNA.BJAM.TU.12016 | |
mRNA.BJAM.TU.12017 | |
mRNA.BJAM.TU.12024 | RNA HELICASE |
mRNA.BJAM.TU.12025 | RNA HELICASE |
mRNA.BJAM.TU.12050 | 40S RIBOSOMAL PROTEIN S7 |
mRNA.BJAM.TU.12052 | DUDULIN-RELATED |
mRNA.BJAM.TU.12095 | O-METHYLTRANSFERASE-RELATED |
mRNA.BJAM.TU.12101 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
mRNA.BJAM.TU.12160 | 60S RIBOSOMAL PROTEIN L10 |
mRNA.BJAM.TU.12174 | |
mRNA.BJAM.TU.12209 | LIPASE |
mRNA.BJAM.TU.12261 | CALCIUM-BINDING PROTEIN 39-RELATED |
mRNA.BJAM.TU.12291 | TF-1 CELL APOPTOSIS RELATED PROTEIN-15 |