About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.TU.12304SOLUTE CARRIER FAMILY 22 MEMBER
mRNA.BJAM.TU.12537HYALURONIDASE
mRNA.BJAM.TU.1255CYTOCHROME P450 FAMILY 4
mRNA.BJAM.TU.1258RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
mRNA.BJAM.TU.12581UNCHARACTERIZED
mRNA.BJAM.TU.12634RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
mRNA.BJAM.TU.12656-
mRNA.BJAM.TU.12738WSCD FAMILY MEMBER CG9164
mRNA.BJAM.TU.12834DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
mRNA.BJAM.TU.12843PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
mRNA.BJAM.TU.12883GLUTATHIONE S TRANSFERASE D10, ISOFORM A-RELATED
mRNA.BJAM.TU.12950TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4
mRNA.BJAM.TU.12953PHOSPHOSERINE AMINOTRANSFERASE
mRNA.BJAM.TU.12968RIBONUCLEASE P SUBUNIT P29
mRNA.BJAM.TU.12987NADH-CYTOCHROME B5 REDUCTASE
mRNA.BJAM.TU.12988NADH-CYTOCHROME B5 REDUCTASE
mRNA.BJAM.TU.13075DNAJ PROTEIN P58IPK HOMOLOG
mRNA.BJAM.TU.13080DNAJ HOMOLOG SUBFAMILY C MEMBER 7
mRNA.BJAM.TU.13104AGAP008648-PA
mRNA.BJAM.TU.13147SODIUM/CHLORIDE DEPENDENT TRANSPORTER
mRNA.BJAM.TU.13211UNCHARACTERIZED
mRNA.BJAM.TU.13214BRCA1-ASSOCIATED ATM ACTIVATOR 1
mRNA.BJAM.TU.13344
mRNA.BJAM.TU.13345BREAST CANCER METASTASIS-SUPPRESSOR 1
mRNA.BJAM.TU.1342ACYL-COA SYNTHETASE
mRNA.BJAM.TU.13485SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.TU.13486SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.TU.13571DNA REPAIR/RNA PROCESSING CPSF FAMILY
mRNA.BJAM.TU.13671ACTIN
mRNA.BJAM.TU.13672ACTIN
mRNA.BJAM.TU.13713CARBOXYLESTERASE
mRNA.BJAM.TU.13851CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN
mRNA.BJAM.TU.13854MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED
mRNA.BJAM.TU.13985RGPR-RELATED
mRNA.BJAM.TU.13989BETA LACTAMASE DOMAIN
mRNA.BJAM.TU.13999RABCONNECTIN-3B, ISOFORM A
mRNA.BJAM.TU.14000NADH DEHYDROGENASE UBIQUINONE 1 ALPHA SUBCOMPLEX SUBUNIT 13
mRNA.BJAM.TU.14106CALRETICULIN AND CALNEXIN
mRNA.BJAM.TU.14172SERINE PEPTIDASE S9 FAMILY MEMBER
mRNA.BJAM.TU.14229MACROGLOBULIN / COMPLEMENT
mRNA.BJAM.TU.14289UNCHARACTERIZED
mRNA.BJAM.TU.14403TB1 PROTEIN-RELATED
mRNA.BJAM.TU.14415CYTOCHROME P450 508A4-RELATED
mRNA.BJAM.TU.14483DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
mRNA.BJAM.TU.14495PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
mRNA.BJAM.TU.14552PKSB
mRNA.BJAM.TU.1457PELOTA
mRNA.BJAM.TU.14581
mRNA.BJAM.TU.14582V-TYPE PROTON ATPASE SUBUNIT C
mRNA.BJAM.TU.14598NICE-3
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