Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Bathynomus jamesi | Arthropoda | - | Hydrothermal vent | 898 | near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E) | 1955234 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM2301448v1 | 5.89Gb | Contig | 2022 | JAJOZX01 | Institute of Oceanology, Chinese Academy of Sciences | PRJNA776076 | 94.80% | 23,221 |
Title | Journal | Pubmed ID |
---|---|---|
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environment | BMC Biology | 35562825 |
Gene ID | Description |
---|---|
mRNA.BJAM.TU.14705 | GLR0591 PROTEIN |
mRNA.BJAM.TU.14788 | TRYPTASE-RELATED |
mRNA.BJAM.TU.14794 | |
mRNA.BJAM.TU.14836 | TUMOR NECROSIS FACTOR INDUCED PROTEIN |
mRNA.BJAM.TU.14965 | WD40 REPEAT PROTEIN |
mRNA.BJAM.TU.15012 | EPOXIDE HYDROLASE 1-RELATED |
mRNA.BJAM.TU.15027 | XANTHINE DEHYDROGENASE |
mRNA.BJAM.TU.15146 | TYROSINE-PROTEIN PHOSPHATASE |
mRNA.BJAM.TU.15271 | |
mRNA.BJAM.TU.15304 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
mRNA.BJAM.TU.15352 | ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE |
mRNA.BJAM.TU.15416 | PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN |
mRNA.BJAM.TU.15446 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD2 |
mRNA.BJAM.TU.15523 | PROTEASE M1 ZINC METALLOPROTEASE |
mRNA.BJAM.TU.15675 | HYDROXYMETHYLGLUTARYL-COA LYASE |
mRNA.BJAM.TU.15690 | BYSTIN |
mRNA.BJAM.TU.15691 | |
mRNA.BJAM.TU.15696 | XANTHINE DEHYDROGENASE |
mRNA.BJAM.TU.15702 | XANTHINE DEHYDROGENASE |
mRNA.BJAM.TU.15726 | CHYMOTRYPSIN-RELATED |
mRNA.BJAM.TU.15816 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
mRNA.BJAM.TU.15873 | TGF-BETA FAMILY |
mRNA.BJAM.TU.15874 | RNA HELICASE |
mRNA.BJAM.TU.15971 | BESTROPHIN |
mRNA.BJAM.TU.15972 | BESTROPHIN |
mRNA.BJAM.TU.15991 | 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE |
mRNA.BJAM.TU.16016 | OXIDASE/PEROXIDASE |
mRNA.BJAM.TU.16018 | |
mRNA.BJAM.TU.16042 | SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG |
mRNA.BJAM.TU.16082 | TRYPTASE-RELATED |
mRNA.BJAM.TU.16187 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
mRNA.BJAM.TU.16227 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
mRNA.BJAM.TU.16275 | GAMMA GLUTAMYL TRANSPEPTIDASE |
mRNA.BJAM.TU.16335 | ARMET-LIKE PROTEIN |
mRNA.BJAM.TU.16353 | |
mRNA.BJAM.TU.16368 | |
mRNA.BJAM.TU.16369 | MULTI-COPPER OXIDASE |
mRNA.BJAM.TU.16462 | GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE |
mRNA.BJAM.TU.16469 | DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE |
mRNA.BJAM.TU.1659 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
mRNA.BJAM.TU.16603 | PUTATIVE ATP-ASE |
mRNA.BJAM.TU.16678 | ATP-DEPENDENT RNA HELICASE DBP3 |
mRNA.BJAM.TU.16687 | |
mRNA.BJAM.TU.16808 | CYTOCHROME P450 FAMILY 4 |
mRNA.BJAM.TU.16898 | ACROSIN-RELATED |
mRNA.BJAM.TU.16904 | |
mRNA.BJAM.TU.16984 | POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE |
mRNA.BJAM.TU.17156 | SERINE PROTEASE INHIBITOR, SERPIN |
mRNA.BJAM.TU.17189 | LD24308P |
mRNA.BJAM.TU.17207 | PROHIBITIN |