About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.TU.14705GLR0591 PROTEIN
mRNA.BJAM.TU.14788TRYPTASE-RELATED
mRNA.BJAM.TU.14794
mRNA.BJAM.TU.14836TUMOR NECROSIS FACTOR INDUCED PROTEIN
mRNA.BJAM.TU.14965WD40 REPEAT PROTEIN
mRNA.BJAM.TU.15012EPOXIDE HYDROLASE 1-RELATED
mRNA.BJAM.TU.15027XANTHINE DEHYDROGENASE
mRNA.BJAM.TU.15146TYROSINE-PROTEIN PHOSPHATASE
mRNA.BJAM.TU.15271
mRNA.BJAM.TU.15304PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
mRNA.BJAM.TU.15352ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE
mRNA.BJAM.TU.15416PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN
mRNA.BJAM.TU.15446HISTONE-LYSINE N-METHYLTRANSFERASE SETD2
mRNA.BJAM.TU.15523PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.TU.15675HYDROXYMETHYLGLUTARYL-COA LYASE
mRNA.BJAM.TU.15690BYSTIN
mRNA.BJAM.TU.15691
mRNA.BJAM.TU.15696XANTHINE DEHYDROGENASE
mRNA.BJAM.TU.15702XANTHINE DEHYDROGENASE
mRNA.BJAM.TU.15726CHYMOTRYPSIN-RELATED
mRNA.BJAM.TU.15816EXOCYST COMPLEX COMPONENT SEC6-RELATED
mRNA.BJAM.TU.15873TGF-BETA FAMILY
mRNA.BJAM.TU.15874RNA HELICASE
mRNA.BJAM.TU.15971BESTROPHIN
mRNA.BJAM.TU.15972BESTROPHIN
mRNA.BJAM.TU.159912,5-DIKETO-D-GLUCONIC ACID REDUCTASE
mRNA.BJAM.TU.16016OXIDASE/PEROXIDASE
mRNA.BJAM.TU.16018
mRNA.BJAM.TU.16042SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG
mRNA.BJAM.TU.16082TRYPTASE-RELATED
mRNA.BJAM.TU.16187HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
mRNA.BJAM.TU.16227MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED
mRNA.BJAM.TU.16275GAMMA GLUTAMYL TRANSPEPTIDASE
mRNA.BJAM.TU.16335ARMET-LIKE PROTEIN
mRNA.BJAM.TU.16353
mRNA.BJAM.TU.16368
mRNA.BJAM.TU.16369MULTI-COPPER OXIDASE
mRNA.BJAM.TU.16462GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE
mRNA.BJAM.TU.16469DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE
mRNA.BJAM.TU.1659MAP/MICROTUBULE AFFINITY-REGULATING KINASE
mRNA.BJAM.TU.16603PUTATIVE ATP-ASE
mRNA.BJAM.TU.16678ATP-DEPENDENT RNA HELICASE DBP3
mRNA.BJAM.TU.16687
mRNA.BJAM.TU.16808CYTOCHROME P450 FAMILY 4
mRNA.BJAM.TU.16898ACROSIN-RELATED
mRNA.BJAM.TU.16904
mRNA.BJAM.TU.16984POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE
mRNA.BJAM.TU.17156SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.TU.17189LD24308P
mRNA.BJAM.TU.17207PROHIBITIN
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