Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Bathynomus jamesi | Arthropoda | - | Hydrothermal vent | 898 | near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E) | 1955234 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM2301448v1 | 5.89Gb | Contig | 2022 | JAJOZX01 | Institute of Oceanology, Chinese Academy of Sciences | PRJNA776076 | 94.80% | 23,221 |
Title | Journal | Pubmed ID |
---|---|---|
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environment | BMC Biology | 35562825 |
Gene ID | Description |
---|---|
mRNA.BJAM.TU.2487 | AGAP000321-PA |
mRNA.BJAM.TU.2488 | AGAP001623-PA |
mRNA.BJAM.TU.2585 | |
mRNA.BJAM.TU.2795 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
mRNA.BJAM.TU.2796 | SURVIVAL MOTOR NEURON-LIKE PROTEIN 1 |
mRNA.BJAM.TU.2953 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
mRNA.BJAM.TU.2965 | - |
mRNA.BJAM.TU.301 | MACROGLOBULIN / COMPLEMENT |
mRNA.BJAM.TU.303 | MACROGLOBULIN / COMPLEMENT |
mRNA.BJAM.TU.3057 | SERINE/THREONINE-PROTEIN KINASE ATM |
mRNA.BJAM.TU.3058 | T7-LIKE MITOCHONDRIAL DNA HELICASE |
mRNA.BJAM.TU.3064 | ZGC:172121 |
mRNA.BJAM.TU.3065 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN |
mRNA.BJAM.TU.3128 | PIKACHURIN-LIKE PROTEIN |
mRNA.BJAM.TU.3152 | UNCHARACTERIZED |
mRNA.BJAM.TU.320 | FARNESYLCYSTEINE LYASE |
mRNA.BJAM.TU.3205 | BETA-CATENIN-LIKE PROTEIN 1 NUCLEAR ASSOCIATED PROTEIN |
mRNA.BJAM.TU.3206 | ATAXIN-7-LIKE PROTEIN 3 |
mRNA.BJAM.TU.3311 | INNEXIN |
mRNA.BJAM.TU.3434 | CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED |
mRNA.BJAM.TU.3528 | SERINE PROTEASE INHIBITOR, SERPIN |
mRNA.BJAM.TU.3605 | DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED |
mRNA.BJAM.TU.3655 | EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1 |
mRNA.BJAM.TU.3658 | CYTOCHROME P450 |
mRNA.BJAM.TU.3660 | CYTOCHROME P450 |
mRNA.BJAM.TU.3865 | CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) |
mRNA.BJAM.TU.389 | UNCHARACTERIZED |
mRNA.BJAM.TU.3924 | E3 UBIQUITIN-PROTEIN LIGASE KCMF1 |
mRNA.BJAM.TU.3937 | QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE |
mRNA.BJAM.TU.3938 | FMS INTERACTING PROTEIN |
mRNA.BJAM.TU.3954 | RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOG |
mRNA.BJAM.TU.4019 | HYALURONIDASE |
mRNA.BJAM.TU.4068 | ALPHA-AMYLASE FAMILY MEMBER |
mRNA.BJAM.TU.4345 | LIPID PHOSPHATE PHOSPHATASE |
mRNA.BJAM.TU.4346 | RNA POLYMERASE II NUCLEAR LOCALIZATION PROTEIN SLC7A6OS-RELATED |
mRNA.BJAM.TU.4472 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
mRNA.BJAM.TU.4603 | RIBOSOMAL PROTEIN L15 |
mRNA.BJAM.TU.4701 | PA-PL1 PHOSPHOLIPASE FAMILY |
mRNA.BJAM.TU.4751 | NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED |
mRNA.BJAM.TU.4775 | METAXIN RELATED |
mRNA.BJAM.TU.4798 | MONOCARBOXYLATE TRANSPORTER |
mRNA.BJAM.TU.4809 | OLIGOPEPTIDE TRANSPORTER-RELATED |
mRNA.BJAM.TU.4826 | TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED |
mRNA.BJAM.TU.4884 | SERINE PROTEASE INHIBITOR, SERPIN |
mRNA.BJAM.TU.5059 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
mRNA.BJAM.TU.5094 | N-ACETYLTRANSFERASE-RELATED |
mRNA.BJAM.TU.5095 | N-ACETYLTRANSFERASE-RELATED |
mRNA.BJAM.TU.5105 | SERINE/THREONINE-PROTEIN KINASE PIM |
mRNA.BJAM.TU.5117 | ANION EXCHANGE PROTEIN |
mRNA.BJAM.TU.5196 | AGAP008648-PA |