Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Bathynomus jamesi | Arthropoda | - | Hydrothermal vent | 898 | near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E) | 1955234 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM2301448v1 | 5.89Gb | Contig | 2022 | JAJOZX01 | Institute of Oceanology, Chinese Academy of Sciences | PRJNA776076 | 94.80% | 23,221 |
Title | Journal | Pubmed ID |
---|---|---|
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environment | BMC Biology | 35562825 |
Gene ID | Description |
---|---|
mRNA.BJAM.TU.20692 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
mRNA.BJAM.TU.2070 | |
mRNA.BJAM.TU.2071 | |
mRNA.BJAM.TU.20725 | ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED |
mRNA.BJAM.TU.20726 | ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED |
mRNA.BJAM.TU.20777 | CHYMOTRYPSIN-RELATED |
mRNA.BJAM.TU.20875 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 11 |
mRNA.BJAM.TU.20903 | CELL CYCLE CONTROL PROTEIN CWF15 |
mRNA.BJAM.TU.20904 | |
mRNA.BJAM.TU.20923 | |
mRNA.BJAM.TU.20952 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
mRNA.BJAM.TU.21017 | ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE |
mRNA.BJAM.TU.21037 | VITELLOGENIN-RELATED |
mRNA.BJAM.TU.21113 | RWD DOMAIN-CONTAINING PROTEIN 3 |
mRNA.BJAM.TU.21130 | EG:BACR7A4.20 PROTEIN |
mRNA.BJAM.TU.21150 | |
mRNA.BJAM.TU.21189 | POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 |
mRNA.BJAM.TU.21191 | BESTROPHIN |
mRNA.BJAM.TU.21207 | |
mRNA.BJAM.TU.21208 | |
mRNA.BJAM.TU.21237 | |
mRNA.BJAM.TU.21255 | THO COMPLEX SUBUNIT 3 THO3 |
mRNA.BJAM.TU.21296 | SERINE PEPTIDASE S9 FAMILY MEMBER |
mRNA.BJAM.TU.21312 | GH04942P |
mRNA.BJAM.TU.21320 | T-BOX PROTEIN-RELATED |
mRNA.BJAM.TU.21321 | T-BOX PROTEIN-RELATED |
mRNA.BJAM.TU.21326 | |
mRNA.BJAM.TU.21357 | EG:EG0003.4 PROTEIN-RELATED |
mRNA.BJAM.TU.21392 | ARYLSULFATASE |
mRNA.BJAM.TU.21491 | |
mRNA.BJAM.TU.21492 | |
mRNA.BJAM.TU.21508 | ELECTRON TRANSPORT OXIDOREDUCTASE |
mRNA.BJAM.TU.21549 | MACROGLOBULIN / COMPLEMENT |
mRNA.BJAM.TU.21628 | |
mRNA.BJAM.TU.21629 | |
mRNA.BJAM.TU.21680 | GLUTATHIONE S TRANSFERASE D10, ISOFORM A-RELATED |
mRNA.BJAM.TU.21727 | |
mRNA.BJAM.TU.21736 | REQUIRED FOR EXCISION 1-B DOMAIN-CONTAINING PROTEIN |
mRNA.BJAM.TU.21738 | |
mRNA.BJAM.TU.21745 | PROTEIN TAR1 |
mRNA.BJAM.TU.21769 | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER |
mRNA.BJAM.TU.21773 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
mRNA.BJAM.TU.21809 | VITELLOGENIN-RELATED |
mRNA.BJAM.TU.21836 | |
mRNA.BJAM.TU.21886 | |
mRNA.BJAM.TU.21887 | |
mRNA.BJAM.TU.21964 | SULFATE TRANSPORTER |
mRNA.BJAM.TU.22024 | - |
mRNA.BJAM.TU.22028 | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44 |
mRNA.BJAM.TU.22036 |