About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.TU.8078ACTIN
mRNA.BJAM.TU.8119
mRNA.BJAM.TU.8144POLYSERASE-RELATED
mRNA.BJAM.TU.8149TORSIN
mRNA.BJAM.TU.8173
mRNA.BJAM.TU.8263FANCONI ANEMIA GROUP D2 PROTEIN
mRNA.BJAM.TU.8312CYTOCHROME P450 508A4-RELATED
mRNA.BJAM.TU.8380UNCHARACTERIZED
mRNA.BJAM.TU.8417ACYL-COENZYME A THIOESTERASE-RELATED
mRNA.BJAM.TU.8418ACYL-COENZYME A THIOESTERASE-RELATED
mRNA.BJAM.TU.8431HEAT SHOCK PROTEIN 70KDA
mRNA.BJAM.TU.8605CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.TU.8613CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.TU.8615CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.TU.8632UNCHARACTERIZED
mRNA.BJAM.TU.8663BETA-HEXOSAMINIDASE
mRNA.BJAM.TU.8676UNCHARACTERIZED
mRNA.BJAM.TU.8679UNCHARACTERIZED
mRNA.BJAM.TU.8691
mRNA.BJAM.TU.8706UNCHARACTERIZED
mRNA.BJAM.TU.8707COMPLEX III ASSEMBLY FACTOR LYRM7
mRNA.BJAM.TU.8758ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE
mRNA.BJAM.TU.8759ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE
mRNA.BJAM.TU.8760BETA-1,4-GLUCURONYLTRANSFERASE 1
mRNA.BJAM.TU.88242,5-DIKETO-D-GLUCONIC ACID REDUCTASE
mRNA.BJAM.TU.887530S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18
mRNA.BJAM.TU.8920MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 18
mRNA.BJAM.TU.8926TETRASPANIN
mRNA.BJAM.TU.893CALRETICULIN AND CALNEXIN
mRNA.BJAM.TU.8973ELECTRON TRANSPORT OXIDOREDUCTASE
mRNA.BJAM.TU.8975ELECTRON TRANSPORT OXIDOREDUCTASE
mRNA.BJAM.TU.9046PROHIBITIN
mRNA.BJAM.TU.9083GALECTIN
mRNA.BJAM.TU.9170BITESIZE, ISOFORM I
mRNA.BJAM.TU.9218ATP-DEPENDENT RNA HELICASE
mRNA.BJAM.TU.9219DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX
mRNA.BJAM.TU.9350PLATELET-DERIVED GROWTH FACTOR
mRNA.BJAM.TU.9412SCAFFOLD ATTACHMENT FACTOR B-RELATED
mRNA.BJAM.TU.9422ANKYRIN REPEAT-CONTAINING
mRNA.BJAM.TU.9534GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE
mRNA.BJAM.TU.9571LONG-CHAIN-FATTY-ACID--COA LIGASE
mRNA.BJAM.TU.9675RIBOSOMAL S SUBUNIT
mRNA.BJAM.TU.978VITELLOGENIN-RELATED
mRNA.BJAM.TU.9819CUTICLE PROTEIN
mRNA.BJAM.TU.9832UNCHARACTERIZED
mRNA.BJAM.TU.9839RAB GDP/GTP EXCHANGE FACTOR
mRNA.BJAM.TU.9881OXYSTEROL-BINDING PROTEIN-RELATED
mRNA.BJAM.TU.998GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1
mRNA.BJAM.scaffold1.1
mRNA.BJAM.scaffold1.2LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
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