About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.

Classification

Animalia (Kingdom); Arthropoda (Phylum); Crustacea (Subphylum); Multicrustacea (Superclass); Malacostraca (Class); Eumalacostraca (Subclass); Peracarida (Superorder); Isopoda (Order); Cymothoida (Suborder); Cymothooidea (Superfamily); Cirolanidae (Family); Bathynomus (Genus); Bathynomus jamesi (Species)

Original Name

Bathynomus jamesi Kou, Chen & Li in Kou, Q., Chen, J., Li, X., He, L. & Wang, Y., 2017

Key Reference Paper

1. Kou Q, Chen J, Li X, et al. New species of the giant deep‐sea isopod genus Bathynomus (Crustacea, Isopoda, Cirolanidae) from Hainan Island, South China Sea[J]. Integrative zoology, 2017, 12(4): 283-291. (Kou et al., 2017)
2. Huang M C, Kawai T, Bruce N L. A new species of Bathynomus Milne-Edwards, 1879 (Isopoda: Cirolanidae) from the southern Gulf of Mexico with a redescription of Bathynomus jamesi Kou, Chen and Li, 2017 from off Pratas Island, Taiwan[J]. Journal of Natural History, 2022, 56(13-16): 885-921. (Huang et al., 2022)

Description

Holotype, 1 immature female (to-tal length [TL] 114 mm). Pleotelson with 11 or 13 short, straightspines; central spine not bifid. Uropod with endopodand exopod distolateral corner slightly produced. Cly-peus lateral margins concave, narrowly rounded apical-ly. Antennal flagellum extending to within pereonite 3. Body suboval, total length(114 mm) approximately 2.2 times as long as maximalwidth (53 mm)

Etymology

The species is named after Dr James K.Lowry in recognition of his great contribution to thecrustacean taxonomy

Distribution

Gulf of Aden, north-western IndianOcean and northern South China Sea, western PacificOcean at a depth of 563–898 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80 586.537.2885.3223,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.TU.18388CYTOCHROME P450 508A4-RELATED
mRNA.BJAM.TU.18390-
mRNA.BJAM.TU.18394VACUOLAR PROTON ATPASES
mRNA.BJAM.TU.1843UNCHARACTERIZED
mRNA.BJAM.TU.1844UPF0545 PROTEIN C22ORF39
mRNA.BJAM.TU.18461THIOREDOXIN PEROXIDASE
mRNA.BJAM.TU.18473N-ACETYLTRANSFERASE-RELATED
mRNA.BJAM.TU.18474N-ACETYLTRANSFERASE-RELATED
mRNA.BJAM.TU.18718DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
mRNA.BJAM.TU.18726ATP-DEPENDENT RNA AND DNA HELICASE
mRNA.BJAM.TU.18806UBIQUITIN-ACTIVATING ENZYME E1
mRNA.BJAM.TU.1881PHYTANOYL-COA ALPHA-HYDROXYLASE
mRNA.BJAM.TU.18818COATOMER SUBUNIT BETA
mRNA.BJAM.TU.18832PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED
mRNA.BJAM.TU.18878ZINC FINGER, CCHC DOMAIN CONTAINING 8
mRNA.BJAM.TU.1890WD-REPEAT PROTEIN BING4
mRNA.BJAM.TU.18904PROSTAGLANDIN G/H SYNTHASE
mRNA.BJAM.TU.18905EPOXIDE HYDROLASE 1-RELATED
mRNA.BJAM.TU.18923TRYPSIN-RELATED
mRNA.BJAM.TU.18941SERINE PROTEASE INHIBITOR, SERPIN
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