Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Bathynomus jamesi | Arthropoda | - | Hydrothermal vent | 898 | near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E) | 1955234 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM2301448v1 | 5.89Gb | Contig | 2022 | JAJOZX01 | Institute of Oceanology, Chinese Academy of Sciences | PRJNA776076 | 94.80% | 23,221 |
Title | Journal | Pubmed ID |
---|---|---|
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environment | BMC Biology | 35562825 |
Gene ID | Description |
---|---|
mRNA.BJAM.TU.8078 | ACTIN |
mRNA.BJAM.TU.8119 | |
mRNA.BJAM.TU.8144 | POLYSERASE-RELATED |
mRNA.BJAM.TU.8149 | TORSIN |
mRNA.BJAM.TU.8173 | |
mRNA.BJAM.TU.8263 | FANCONI ANEMIA GROUP D2 PROTEIN |
mRNA.BJAM.TU.8312 | CYTOCHROME P450 508A4-RELATED |
mRNA.BJAM.TU.8380 | UNCHARACTERIZED |
mRNA.BJAM.TU.8417 | ACYL-COENZYME A THIOESTERASE-RELATED |
mRNA.BJAM.TU.8418 | ACYL-COENZYME A THIOESTERASE-RELATED |
mRNA.BJAM.TU.8431 | HEAT SHOCK PROTEIN 70KDA |
mRNA.BJAM.TU.8605 | CYSTEINE PROTEASE FAMILY C1-RELATED |
mRNA.BJAM.TU.8613 | CYSTEINE PROTEASE FAMILY C1-RELATED |
mRNA.BJAM.TU.8615 | CYSTEINE PROTEASE FAMILY C1-RELATED |
mRNA.BJAM.TU.8632 | UNCHARACTERIZED |
mRNA.BJAM.TU.8663 | BETA-HEXOSAMINIDASE |
mRNA.BJAM.TU.8676 | UNCHARACTERIZED |
mRNA.BJAM.TU.8679 | UNCHARACTERIZED |
mRNA.BJAM.TU.8691 | |
mRNA.BJAM.TU.8706 | UNCHARACTERIZED |
mRNA.BJAM.TU.8707 | COMPLEX III ASSEMBLY FACTOR LYRM7 |
mRNA.BJAM.TU.8758 | ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE |
mRNA.BJAM.TU.8759 | ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE |
mRNA.BJAM.TU.8760 | BETA-1,4-GLUCURONYLTRANSFERASE 1 |
mRNA.BJAM.TU.8824 | 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE |
mRNA.BJAM.TU.8875 | 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 |
mRNA.BJAM.TU.8920 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 18 |
mRNA.BJAM.TU.8926 | TETRASPANIN |
mRNA.BJAM.TU.893 | CALRETICULIN AND CALNEXIN |
mRNA.BJAM.TU.8973 | ELECTRON TRANSPORT OXIDOREDUCTASE |
mRNA.BJAM.TU.8975 | ELECTRON TRANSPORT OXIDOREDUCTASE |
mRNA.BJAM.TU.9046 | PROHIBITIN |
mRNA.BJAM.TU.9083 | GALECTIN |
mRNA.BJAM.TU.9170 | BITESIZE, ISOFORM I |
mRNA.BJAM.TU.9218 | ATP-DEPENDENT RNA HELICASE |
mRNA.BJAM.TU.9219 | DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX |
mRNA.BJAM.TU.9350 | PLATELET-DERIVED GROWTH FACTOR |
mRNA.BJAM.TU.9412 | SCAFFOLD ATTACHMENT FACTOR B-RELATED |
mRNA.BJAM.TU.9422 | ANKYRIN REPEAT-CONTAINING |
mRNA.BJAM.TU.9534 | GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE |
mRNA.BJAM.TU.9571 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
mRNA.BJAM.TU.9675 | RIBOSOMAL S SUBUNIT |
mRNA.BJAM.TU.978 | VITELLOGENIN-RELATED |
mRNA.BJAM.TU.9819 | CUTICLE PROTEIN |
mRNA.BJAM.TU.9832 | UNCHARACTERIZED |
mRNA.BJAM.TU.9839 | RAB GDP/GTP EXCHANGE FACTOR |
mRNA.BJAM.TU.9881 | OXYSTEROL-BINDING PROTEIN-RELATED |
mRNA.BJAM.TU.998 | GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1 |
mRNA.BJAM.scaffold1.1 | |
mRNA.BJAM.scaffold1.2 | LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1 |