Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Bathynomus jamesi | Arthropoda | - | Hydrothermal vent | 898 | near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E) | 1955234 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM2301448v1 | 5.89Gb | Contig | 2022 | JAJOZX01 | Institute of Oceanology, Chinese Academy of Sciences | PRJNA776076 | 94.80% | 23,221 |
Title | Journal | Pubmed ID |
---|---|---|
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environment | BMC Biology | 35562825 |
Gene ID | Description |
---|---|
mRNA.BJAM.TU.5240 | FOUR AND A HALF LIM DOMAINS PROTEIN |
mRNA.BJAM.TU.5248 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
mRNA.BJAM.TU.5249 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
mRNA.BJAM.TU.5282 | ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED |
mRNA.BJAM.TU.5516 | SPARC OSTEONECTIN |
mRNA.BJAM.TU.5547 | EH DOMAIN |
mRNA.BJAM.TU.5800 | IP06524P-RELATED |
mRNA.BJAM.TU.59 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT J |
mRNA.BJAM.TU.60 | UNCHARACTERIZED |
mRNA.BJAM.TU.6029 | 40S RIBOSOMAL PROTEIN S7 |
mRNA.BJAM.TU.6031 | 40S RIBOSOMAL PROTEIN S7 |
mRNA.BJAM.TU.6033 | 40S RIBOSOMAL PROTEIN S7 |
mRNA.BJAM.TU.6183 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
mRNA.BJAM.TU.6225 | |
mRNA.BJAM.TU.6226 | |
mRNA.BJAM.TU.6384 | PARTNER OF SLD5 |
mRNA.BJAM.TU.6385 | SELENOPROTEIN S |
mRNA.BJAM.TU.639 | RUVB-RELATED REPTIN AND PONTIN |
mRNA.BJAM.TU.649 | CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE |
mRNA.BJAM.TU.650 | MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT |
mRNA.BJAM.TU.6512 | |
mRNA.BJAM.TU.6535 | BTK-BINDING PROTEIN-RELATED |
mRNA.BJAM.TU.6636 | |
mRNA.BJAM.TU.6798 | GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1 |
mRNA.BJAM.TU.6837 | UNCHARACTERIZED |
mRNA.BJAM.TU.6927 | TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA |
mRNA.BJAM.TU.7106 | RNA RECOGNITION MOTIF-CONTAINING |
mRNA.BJAM.TU.712 | CYPHER, ISOFORM B |
mRNA.BJAM.TU.713 | RING BOX |
mRNA.BJAM.TU.7176 | 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL |
mRNA.BJAM.TU.7231 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
mRNA.BJAM.TU.7398 | POLYKETIDE SYNTHASE-RELATED |
mRNA.BJAM.TU.7419 | ANNEXIN |
mRNA.BJAM.TU.7591 | TRYPSIN-RELATED |
mRNA.BJAM.TU.7628 | METAXIN RELATED |
mRNA.BJAM.TU.7639 | HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2 |
mRNA.BJAM.TU.7865 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 11 |
mRNA.BJAM.TU.7898 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
mRNA.BJAM.TU.7905 | PROMININ PROM PROTEIN |
mRNA.BJAM.TU.7938 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
mRNA.BJAM.TU.7939 | NADH DEHYDROGENASE |
mRNA.BJAM.TU.7951 | UNCHARACTERIZED |
mRNA.BJAM.TU.7952 | ZINC FINGER PROTEIN 622 |
mRNA.BJAM.TU.7961 | |
mRNA.BJAM.TU.7962 | |
mRNA.BJAM.TU.7972 | CUE DOMAIN CONTAINING PROTEIN 1 |
mRNA.BJAM.TU.7973 | SUPEROXIDE DISMUTASE 2 |
mRNA.BJAM.TU.8046 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
mRNA.BJAM.TU.8065 | |
mRNA.BJAM.TU.8077 | BTB DOMAIN TRANSCRIPTION FACTOR |