Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Bathynomus jamesi | Arthropoda | - | Hydrothermal vent | 898 | near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E) | 1955234 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM2301448v1 | 5.89Gb | Contig | 2022 | JAJOZX01 | Institute of Oceanology, Chinese Academy of Sciences | PRJNA776076 | 94.80% | 23,221 |
Title | Journal | Pubmed ID |
---|---|---|
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environment | BMC Biology | 35562825 |
Gene ID | Description |
---|---|
mRNA.BJAM.TU.18988 | 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 |
mRNA.BJAM.TU.19087 | PHOSPHOMANNOMUTASE 45A |
mRNA.BJAM.TU.19235 | |
mRNA.BJAM.TU.19237 | ACROSIN-RELATED |
mRNA.BJAM.TU.19270 | HELICASE SRCAP-RELATED |
mRNA.BJAM.TU.19287 | SERINE PROTEASE INHIBITOR, SERPIN |
mRNA.BJAM.TU.19288 | SERINE PROTEASE INHIBITOR, SERPIN |
mRNA.BJAM.TU.19300 | OTU DOMAIN CONTAINING PROTEIN |
mRNA.BJAM.TU.19303 | CELL DIVISION CYCLE 16,23,27 |
mRNA.BJAM.TU.1933 | SOLUTE CARRIER FAMILY 22 MEMBER |
mRNA.BJAM.TU.19432 | UV EXCISION REPAIR PROTEIN RAD23 |
mRNA.BJAM.TU.1945 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 |
mRNA.BJAM.TU.19461 | 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE |
mRNA.BJAM.TU.19464 | |
mRNA.BJAM.TU.19467 | |
mRNA.BJAM.TU.19538 | FATTY ACID SYNTHASE |
mRNA.BJAM.TU.1955 | |
mRNA.BJAM.TU.19646 | PROTEIN PHOSPHATASE |
mRNA.BJAM.TU.19649 | - |
mRNA.BJAM.TU.19656 | SRCR DOMAIN-CONTAINING PROTEIN |
mRNA.BJAM.TU.19665 | GLR0591 PROTEIN |
mRNA.BJAM.TU.1971 | |
mRNA.BJAM.TU.1972 | |
mRNA.BJAM.TU.19780 | MONOCARBOXYLATE TRANSPORTER |
mRNA.BJAM.TU.19791 | PROTEIN PHOSPHATASE |
mRNA.BJAM.TU.19797 | SORBITOL DEHYDROGENASE |
mRNA.BJAM.TU.19828 | |
mRNA.BJAM.TU.19874 | DNAJ-LIKE-2, ISOFORM A-RELATED |
mRNA.BJAM.TU.19880 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
mRNA.BJAM.TU.19894 | KINESIN-ASSOCIATED PROTEINS |
mRNA.BJAM.TU.19967 | |
mRNA.BJAM.TU.19987 | LD24308P |
mRNA.BJAM.TU.20034 | RAN BINDING PROTEIN |
mRNA.BJAM.TU.20063 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
mRNA.BJAM.TU.20069 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
mRNA.BJAM.TU.20077 | UNCHARACTERIZED |
mRNA.BJAM.TU.20133 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
mRNA.BJAM.TU.20153 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
mRNA.BJAM.TU.20154 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
mRNA.BJAM.TU.20197 | |
mRNA.BJAM.TU.20209 | CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED |
mRNA.BJAM.TU.20210 | STEROID RECEPTOR RNA ACTIVATOR 1 |
mRNA.BJAM.TU.20296 | TRYPSIN-RELATED |
mRNA.BJAM.TU.20315 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5A |
mRNA.BJAM.TU.20338 | SULFOTRANSFERASE SULT |
mRNA.BJAM.TU.20514 | 4.1 G PROTEIN |
mRNA.BJAM.TU.20629 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5A |
mRNA.BJAM.TU.20646 | POLYSERASE-RELATED |
mRNA.BJAM.TU.20651 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
mRNA.BJAM.TU.20673 | GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED |