Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7998413.1 | MYOTUBULARIN-RELATED |
| CAI7998423.1 | CHROMATE REDUCTASE |
| CAI7998425.1 | PBS LYASE HEAT-LIKE PROTEIN |
| CAI7998427.1 | - |
| CAI7998429.1 | - |
| CAI7998431.1 | OSTEOCLAST-STIMULATING FACTOR 1 |
| CAI7998433.1 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI7998435.1 | AMNIONLESS |
| CAI7998437.1 | |
| CAI7998439.1 | |
| CAI7998441.1 | |
| CAI7998445.1 | UNCHARACTERIZED |
| CAI7998447.1 | UNCHARACTERIZED |
| CAI7998443.1 | L-ASPARAGINASE |
| CAI7998449.1 | ZGC:101016 |
| CAI7998451.1 | GOLGIN |
| CAI7998453.1 | SORTING NEXIN |
| CAI7998455.1 | SOLUTE CARRIER FAMILY 22 MEMBER 18 |
| CAI7998457.1 | SOLUTE CARRIER FAMILY 22 MEMBER 18 |
| CAI7998459.1 | SOLUTE CARRIER FAMILY 22 MEMBER 18 |
| CAI7998461.1 | SOLUTE CARRIER FAMILY 22 MEMBER 18 |
| CAI7998465.1 | GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE |
| CAI7998467.1 | GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE |
| CAI7998469.1 | GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE |
| CAI7998463.1 | GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE |
| CAI7998471.1 | GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE |
| CAI7998475.1 | CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN |
| CAI7998473.1 | CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN |
| CAI7998477.1 | |
| CAI7998481.1 | ADP-RIBOSYLGLYCOHYDROLASE |
| CAI7998483.1 | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED |
| CAI7998501.1 | |
| CAI7998503.1 | |
| CAI7998505.1 | |
| CAI7998507.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI7998509.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI7998511.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI7998513.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI7998515.1 | THIAMINE PYROPHOSPHATE ENZYMES |
| CAI7998517.1 | THIAMINE PYROPHOSPHATE ENZYMES |
| CAI7998519.1 | |
| CAI7998521.1 | PEROXYUREIDOACRYLATE/UREIDOACRYLATE AMIDOHYDROLASE-RELATED |
| CAI7998523.1 | GLR0591 PROTEIN |
| CAI7998525.1 | BLR8190 PROTEIN |
| CAI7998527.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI7998529.1 | 39S RIBOSOMAL PROTEIN L12 |
| CAI7998531.1 | 39S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL |
| CAI7998533.1 | 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL |
| CAI7998535.1 | 60S RIBOSOMAL PROTEIN L12 |
| CAI7998537.1 | RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG |
